RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 EFCAB14O75071 495 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 CCNKO75909 580 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 CYP17A1P05093 508 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 ADRB3P13945 408 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 OPRD1P41143 372 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 CRYBB2P43320 205 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 CCR8P51685 355 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 NKX2-5P52952 324 aaPredicted RBP17.74■□□□□ 0.43
CPSF3-201ENST00000238112 TCEAL5Q5H9L2 206 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 WDR53Q7Z5U6 358 aaPredicted RBP17.74■□□□□ 0.43
CPSF3-201ENST00000238112 BCDIN3DQ7Z5W3 292 aaKnown RBP17.74■□□□□ 0.43
CPSF3-201ENST00000238112 AMZ2Q86W34 360 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 C12orf40Q86WS4 652 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 NANOGP1Q8N7R0 232 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 PROKR2Q8NFJ6 384 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 SLC7A13Q8TCU3 470 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 ING5Q8WYH8 240 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 TREX2Q9BQ50 279 aaPredicted RBP17.74■□□□□ 0.43
CPSF3-201ENST00000238112 BARHL1Q9BZE3 327 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 NDUFB11Q9NX14 153 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 ACAD8Q9UKU7 415 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 SSR3Q9UNL2 185 aa17.74■□□□□ 0.43
CPSF3-201ENST00000238112 ZNF670-ZNF695F2Z2N8 137 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 SSX4O60224 188 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 CYP7B1O75881 506 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 ACRP10323 421 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 PIN1Q13526 163 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 OCLNQ16625 522 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 AGAP6Q5VW22 663 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 RSBN1Q5VWQ0 802 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 TMPRSS11AQ6ZMR5 421 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 IQCF1Q8N6M8 205 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 CELF5Q8N6W0 485 aaKnown RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 TMIEQ8NEW7 156 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 GPR151Q8TDV0 419 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 SLC6A18Q96N87 628 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 AGAP4Q96P64 663 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 KLHL20Q9Y2M5 609 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 CCDC88CQ9P219 2028 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 HYKKA2RU49 373 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 H3BQ06 376 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 RPN2P04844 631 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 KRT8P05787 483 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 HBQ1P09105 142 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 CLTBP09497 229 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 OR12D1P0DN82 309 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 PPP2R1BP30154 601 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 FRKP42685 505 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 OR2B6P58173 313 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 MLLT11Q13015 90 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 RPA4Q13156 261 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 ARHGAP19Q14CB8 494 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 SYPL1Q16563 259 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 LRRC26Q2I0M4 334 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 SETD6Q8TBK2 473 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 XAGE5Q8WWM1 108 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 NRTNQ99748 197 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 WFDC6Q9BQY6 131 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 MVB12BQ9H7P6 319 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 SIAEQ9HAT2 523 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 WASH6PQ9NQA3 447 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 TBC1D24Q9ULP9 559 aa17.73■□□□□ 0.43
CPSF3-201ENST00000238112 PCYT1BQ9Y5K3 369 aaPredicted RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 MTCL1Q9Y4B5 1905 aaKnown RBP17.73■□□□□ 0.43
CPSF3-201ENST00000238112 H7BY64 318 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 WWP2O00308 870 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 TLX2O43763 284 aaPredicted RBP17.72■□□□□ 0.43
CPSF3-201ENST00000238112 NR2F1P10589 423 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 CCL5P13501 91 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 GPC1P35052 558 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 NR4A2P43354 598 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 LIPKQ5VXJ0 399 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 RNLSQ5VYX0 342 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 IL17RCQ8NAC3 791 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 NXPE3Q969Y0 559 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 RGMAQ96B86 450 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 SLC35G5Q96KT7 338 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 PRAP1Q96NZ9 151 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 OR2A14Q96R47 310 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 FNDC11Q9BVV2 318 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 OR51I1Q9H343 314 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 NPAP1Q9NZP6 1156 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 TRPC4Q9UBN4 977 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 HCN2Q9UL51 889 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 A4GNTQ9UNA3 340 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 HEPACAM2A8MVW5 462 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 M0R3H8 397 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 NDUFS4O43181 175 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 TMPRSS11DO60235 418 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 TPST2O60704 377 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 REEP5Q00765 189 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 ALDH6A1Q02252 535 aaKnown RBP17.72■□□□□ 0.43
CPSF3-201ENST00000238112 ARMC4Q5T2S8 1044 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 C9orf64Q5T6V5 341 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 ZNF544Q6NX49 715 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 PODNL1Q6PEZ8 512 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 USP30Q70CQ3 517 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 OR5K2Q8NHB8 316 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 CAPSLQ8WWF8 208 aa17.72■□□□□ 0.43
CPSF3-201ENST00000238112 ASB15Q8WXK1 588 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms