RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CRELD1Q96HD1 420 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SLC35G5Q96KT7 338 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 WDR12Q9GZL7 423 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 OR51I1Q9H343 314 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ANKHQ9HCJ1 492 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 HMG20AQ9NP66 347 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 AMBNQ9NP70 447 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PRDM8Q9NQV8 689 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SEMA3GQ9NS98 782 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 CNOT2Q9NZN8 540 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 RHCGQ9UBD6 479 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 REV1Q9UBZ9 1251 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 CES1P1Q9UKY3 287 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 DUSP12Q9UNI6 340 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PCDHGA4Q9Y5G9 962 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 COLEC10Q9Y6Z7 277 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 A0A0G2JN53 185 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 A0A1W2PR48 441 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 C4orf51C9J302 202 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 J3QRK9 145 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 FAAHO00519 579 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 HAT1O14929 419 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 LINC01565O15544 149 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ERI3O43414 337 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SLC28A2O43868 658 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 H1F0P07305 194 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 POU2F1P14859 743 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 NTSP30990 170 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 LIPAP38571 399 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 NCS1P62166 190 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 TUBA1BP68363 451 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SLAMF1Q13291 335 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 CEBPEQ15744 281 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PRAMEF8Q5VWM4 474 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PRAMEF7Q5VXH5 474 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 BHLHB9Q6PI77 547 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 WASH2PQ6VEQ5 465 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 DCDC5Q6ZRR9 648 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 TUBA1AQ71U36 451 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ZBTB46Q86UZ6 589 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 FBXL6Q8N531 539 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 MFSD9Q8NBP5 474 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 OR4D11Q8NGI4 311 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 C9orf43Q8TAL5 461 aaPredicted RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 MOAP1Q96BY2 351 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 COX4I2Q96KJ9 171 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 DACH2Q96NX9 599 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SPATA5L1Q9BVQ7 753 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 BTBD2Q9BX70 525 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 CDCA4Q9BXL8 241 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 UCK2Q9BZX2 261 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ZCCHC3Q9NUD5 404 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SEC14L3Q9UDX4 400 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 OSGIN1Q9UJX0 560 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PNMA8BQ9ULN7 279 aaPredicted RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SCML1Q9UN30 329 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SNX7Q9UNH6 387 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ATG4BQ9Y4P1 393 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PMF1-BGLAPU3KQ54 211 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 hCG_2014768A0A024R1R8 64 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 EFCAB10A6NFE3 127 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 CBFA2T3O75081 653 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SULT1C4O75897 302 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SLITRK5O94991 958 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 NADKO95544 446 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-201ENST00000237186 NDUFS1P28331 727 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 CMPK1P30085 196 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 PPP2R1BP30154 601 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 GPC1P35052 558 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 IDUAP35475 653 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 KHKP50053 298 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 ANXA11P50995 505 aaKnown RBP15.28■□□□□ 0.04
UBE3D-201ENST00000237186 NCBP2P52298 156 aaKnown RBP eCLIP15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SEC13P55735 322 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 KIAA1024LP59773 190 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SNRPGP62308 76 aaKnown RBP15.28■□□□□ 0.04
UBE3D-201ENST00000237186 ST3GAL4Q11206 333 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 HYAL1Q12794 435 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 GNA13Q14344 377 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 NR1D2Q14995 579 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SEC23BQ15437 767 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SYPL1Q16563 259 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 TIGD6Q17RP2 521 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SDE2Q6IQ49 451 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SLC46A3Q7Z3Q1 461 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 IGFN1Q86VF2 1251 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 KRT73Q86Y46 540 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 FAM46DQ8NEK8 389 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 BBS10Q8TAM1 723 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SUN3Q8TAQ9 357 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 XAGE5Q8WWM1 108 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 BBS4Q96RK4 519 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SLIRPQ9GZT3 109 aaKnown RBP15.28■□□□□ 0.04
UBE3D-201ENST00000237186 FGF22Q9HCT0 170 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 FZD3Q9NPG1 666 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 MS4A12Q9NXJ0 267 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SPHK1Q9NYA1 384 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 GPR83Q9NYM4 423 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 OR6C2Q9NZP2 312 aa15.28■□□□□ 0.04
UBE3D-201ENST00000237186 SELENONQ9NZV5 590 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms