RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 THAP3Q8WTV1 239 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 NUDT8Q8WV74 236 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 VMP1Q96GC9 406 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 SCMH1Q96GD3 660 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 EGLN2Q96KS0 407 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 ZNF354BQ96LW1 612 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 DIDO1Q9BTC0 2240 aaKnown RBP12.75□□□□□ -0.37
VEGFA-201ENST00000230480 CLMPQ9H6B4 373 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 CXorf21Q9HAI6 301 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 SENP1Q9P0U3 644 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 ZNF639Q9UID6 485 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 TRAF6Q9Y4K3 522 aa12.75□□□□□ -0.37
VEGFA-201ENST00000230480 WDR91A4D1P6 747 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 GABRR3A8MPY1 467 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TCP11X1B4DZS4 312 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 KLHL41O60662 606 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 IL3P08700 152 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TIA1P31483 386 aaKnown RBP eCLIP12.74□□□□□ -0.379e-14■■■□□ 15.1
VEGFA-201ENST00000230480 GALNSP34059 522 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 CLCN2P51788 898 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 NR0B1P51843 470 aaKnown RBP12.74□□□□□ -0.37
VEGFA-201ENST00000230480 HK2P52789 917 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 MAPK12P53778 367 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 SLC37A1P57057 533 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TAS2R50P59544 299 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TRA2BP62995 288 aaKnown RBP12.74□□□□□ -0.37
VEGFA-201ENST00000230480 RNF4P78317 190 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 FUT7Q11130 342 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TLR1Q15399 786 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 CEBPEQ15744 281 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 MEP1AQ16819 746 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 MPEG1Q2M385 716 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 SPRED3Q2MJR0 410 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 RFTN2Q52LD8 501 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-201ENST00000230480 XKR7Q5GH72 579 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 CFAP157Q5JU67 520 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 RNFT1Q5M7Z0 435 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
VEGFA-201ENST00000230480 ABHD17BQ5VST6 288 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 OR52E8Q6IFG1 317 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 FAM71E1Q6IPT2 247 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 FAM111BQ6SJ93 734 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 ST13P4Q8IZP2 240 aaPredicted RBP12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TMEM132CQ8N3T6 1108 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 ZNF441Q8N8Z8 693 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 OR14A16Q8NHC5 309 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 SUN3Q8TAQ9 357 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 CPT1CQ8TCG5 803 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 CTHRC1Q96CG8 243 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 TRMOQ9BU70 441 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 EBPLQ9BY08 206 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 OR8D2Q9GZM6 311 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 EPS8L2Q9H6S3 715 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 AHSPQ9NZD4 102 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 MYO7BQ6PIF6 2116 aa12.74□□□□□ -0.37
VEGFA-201ENST00000230480 PCNX3Q9H6A9 2034 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 HECTD1Q9ULT8 2610 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 LSM1O15116 133 aaKnown RBP12.73□□□□□ -0.37
VEGFA-201ENST00000230480 PCDH7O60245 1069 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 NME6O75414 186 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-201ENST00000230480 RSL1D1O76021 490 aaKnown RBP12.73□□□□□ -0.37
VEGFA-201ENST00000230480 CBX6O95503 412 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 IFNA16P05015 189 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 LINC00032P0C843 101 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 CPMP14384 443 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 MST1P26927 711 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 SSTR4P31391 388 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 BUD31P41223 144 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-201ENST00000230480 XKP51811 444 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 TDGF1P3P51864 188 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 ARG2P78540 354 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 PMP22Q01453 160 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 LTB4RQ15722 352 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 PRICKLE4Q2TBC4 344 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 PAGE2Q7Z2X7 111 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 MDGA2Q7Z553 956 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 GRHL3Q8TE85 626 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 NTNG2Q96CW9 530 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 MYCBPQ99417 103 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-201ENST00000230480 DEFB126Q9BYW3 111 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 SLAMF7Q9NQ25 335 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 DEPPQ9NTK1 212 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 MYOTQ9UBF9 498 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 HAO1Q9UJM8 370 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 MID2Q9UJV3 735 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 G3BP2Q9UN86 482 aaKnown RBP12.73□□□□□ -0.37
VEGFA-201ENST00000230480 DTX4Q9Y2E6 619 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 POLR3HQ9Y535 204 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-201ENST00000230480 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
VEGFA-201ENST00000230480 SPTBN1Q01082 2364 aaKnown RBP12.72□□□□□ -0.37
VEGFA-201ENST00000230480 UTP20O75691 2785 aaKnown RBP12.72□□□□□ -0.37
VEGFA-201ENST00000230480 MED12Q93074 2177 aa12.72□□□□□ -0.37
VEGFA-201ENST00000230480 C1orf226A1L170 272 aa12.72□□□□□ -0.37
VEGFA-201ENST00000230480 PINLYPA6NC86 204 aa12.72□□□□□ -0.37
VEGFA-201ENST00000230480 PIP5K1BO14986 540 aa12.72□□□□□ -0.37
VEGFA-201ENST00000230480 BIRC5O15392 142 aa12.72□□□□□ -0.37
VEGFA-201ENST00000230480 PRAMEF2O60811 474 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms