RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 VSX2P58304 361 aaPredicted RBP13.4□□□□□ -0.26
SF1-201ENST00000227503 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
SF1-201ENST00000227503 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
SF1-201ENST00000227503 SIGLEC14Q08ET2 396 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SREBF2Q12772 1141 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 CEACAM20Q6UY09 585 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 KIF18BQ86Y91 864 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 TAGAPQ8N103 731 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 GPR156Q8NFN8 814 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 ADAMTS19Q8TE59 1207 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 HHIPQ96QV1 700 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SMAD5Q99717 465 aaKnown RBP13.4□□□□□ -0.26
SF1-201ENST00000227503 GPATCH2Q9NW75 528 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 RNF186Q9NXI6 227 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 RDH8Q9NYR8 311 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 NCKAP1Q9Y2A7 1128 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 PCDHB11Q9Y5F2 797 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 CDH10Q9Y6N8 788 aa13.4□□□□□ -0.26
SF1-201ENST00000227503 AGAP14A8MT82 685 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 SEC14L5O43304 696 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 PPM1BO75688 479 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 PRPS2P11908 318 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 PXNP49023 591 aaPredicted RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 SRP54P61011 504 aaKnown RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 GPR33Q49SQ1 333 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 IFI44LQ53G44 452 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 GPR155Q7Z3F1 870 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 TSPAN33Q86UF1 283 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 NANOGP1Q8N7R0 232 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 HJURPQ8NCD3 748 aaPredicted RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 DUSP18Q8NEJ0 188 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 SLC22A12Q96S37 553 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 TMEM43Q9BTV4 400 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 MND1Q9BWT6 205 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 SLC32A1Q9H598 525 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 SLC25A19Q9HC21 320 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 SLCO1C1Q9NYB5 712 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 BACE2Q9Y5Z0 518 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 ZNF106Q9H2Y7 1883 aaKnown RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 C2orf92A0A1B0GVN3 265 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 ANXA5P08758 320 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 HOXB6P17509 224 aaKnown RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 SPAM1P38567 509 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 FABP5Q01469 135 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 ZNF730Q6ZMV8 503 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 TMEM150AQ86TG1 271 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 CBARPQ8N350 705 aaPredicted RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 GPR26Q8NDV2 337 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 KCTD7Q96MP8 289 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 SORBS1Q9BX66 1292 aaKnown RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 RAB23Q9ULC3 237 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 PPIEQ9UNP9 301 aaKnown RBP13.39□□□□□ -0.27
SF1-201ENST00000227503 SLC22A14Q9Y267 594 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 MAP4K5Q9Y4K4 846 aa13.39□□□□□ -0.27
SF1-201ENST00000227503 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 A0A1W2PQ45 241 aaPredicted RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 A0A1W2PQY0 241 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 ZNF821O75541 412 aaPredicted RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 IL1AP01583 271 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 OPRD1P41143 372 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TM4SF4P48230 202 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 RPIAP49247 311 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 CTAG1AP78358 180 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
SF1-201ENST00000227503 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.38□□□□□ -0.27
SF1-201ENST00000227503 GPR176Q14439 515 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TEAD4Q15561 434 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 LGALSLQ3ZCW2 172 aaPredicted RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 TPGS1Q6ZTW0 290 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 ST8SIA4Q92187 359 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 POP5Q969H6 163 aaKnown RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 VOPP1Q96AW1 172 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 RBP7Q96R05 134 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 DUSP26Q9BV47 211 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 CHST8Q9H2A9 424 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 KCTD5Q9NXV2 234 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 ING4Q9UNL4 249 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 POM121CA8CG34 1229 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 HEPACAM2A8MVW5 462 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 LGALS8O00214 317 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TOR1AO14656 332 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 PROM1O43490 865 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TLX2O43763 284 aaPredicted RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 SLC43A1O75387 559 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 ABLIM3O94929 683 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 CBSLP0DN79 551 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TFPIP10646 304 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 PRPH2P23942 346 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 CBSP35520 551 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 STK19P49842 368 aaPredicted RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 B4GALNT1Q00973 533 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 SEC23BQ15437 767 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 CDKL4Q5MAI5 379 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 TRIM69Q86WT6 500 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms