RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CDK6Q00534 326 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 CCINQ13939 588 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 LRRC32Q14392 662 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 C6orf141Q5SZD1 244 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 GCNT6Q5T4J0 391 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 TMEM236Q5W0B7 351 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 TTC23Q5W5X9 447 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 FAM71E1Q6IPT2 247 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 ADAMTSL4Q6UY14 1074 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 ZNF765Q7L2R6 523 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 METTL4Q8N3J2 472 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 TTC29Q8NA56 475 aaPredicted RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 CHDHQ8NE62 594 aaPredicted RBP9.46□□□□□ -0.9
USP11-201ENST00000218348 ZCCHC10Q8TBK6 192 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 TBC1D29Q9UFV1 150 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 RPS6KA6Q9UK32 745 aa9.46□□□□□ -0.9
USP11-201ENST00000218348 TNRC6BQ9UPQ9 1833 aaKnown RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 IGKV1-8A0A0C4DH67 115 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 ZNF860A6NHJ4 632 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 ACADMP11310 421 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 CD247P20963 164 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 NTSR1P30989 418 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 ACTR1BP42025 376 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 ALDH3B2P48448 385 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 RAD23AP54725 363 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 ADPRHP54922 357 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 ACTR1AP61163 376 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 NPTX1Q15818 432 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 DUSP7Q16829 419 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 PERM1Q5SV97 790 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 LAIR1Q6GTX8 287 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 KLHL17Q6TDP4 642 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 RBM45Q8IUH3 476 aaKnown RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 LAS2Q8IYD9 372 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 TTLQ8NG68 377 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 SMPDL3AQ92484 453 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 RAB7BQ96AH8 199 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 EFHD2Q96C19 240 aaPredicted RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 ARSGQ96EG1 525 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 TEFMQ96QE5 360 aaKnown RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 FEVQ99581 238 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 TMEM168Q9H0V1 697 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 RHBGQ9H310 441 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 C12orf10Q9HB07 376 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 CAPN10Q9HC96 672 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 PAK1IP1Q9NWT1 392 aaPredicted RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 ERVK-18Q9QC07 812 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 A0A1W2PPV9 198 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 C5orf58C9J3I9 102 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 BTN3A3O00478 584 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 GPR37L1O60883 481 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 INMTO95050 263 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 TP53P04637 393 aaPredicted RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 HSD3B1P14060 373 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 HSD3B2P26439 372 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 PXNP49023 591 aaPredicted RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 RPS21P63220 83 aaKnown RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 ID2Q02363 134 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 USP51Q70EK9 711 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 CBLL1Q75N03 491 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 CCDC116Q8IYX3 515 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 SYNPOQ8N3V7 929 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 HORMAD2Q8N7B1 307 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 TP53I13Q8NBR0 393 aaPredicted RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 RPLP0P6Q8NHW5 317 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 FAM131CQ96AQ9 280 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 COQ8BQ96D53 544 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 APOOQ9BUR5 198 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 PRR14Q9BWN1 585 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 NLNQ9BYT8 704 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 LHPPQ9H008 270 aa9.45□□□□□ -0.9
USP11-201ENST00000218348 QRSL1Q9H0R6 528 aaKnown RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 ZNF282Q9UDV7 671 aaPredicted RBP9.45□□□□□ -0.9
USP11-201ENST00000218348 PRAMEF25A6NGN4 478 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 C4orf51C9J302 202 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 STMND1H3BQB6 276 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 TNFRSF11BO00300 401 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 PGRMC2O15173 223 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 PRMT3O60678 531 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 ANGPTL1O95841 491 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 FADS2O95864 444 aaKnown RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 ZNF182P17025 639 aaPredicted RBP9.44□□□□□ -0.9
USP11-201ENST00000218348 CTHP32929 405 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 SLC9A3P48764 834 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 MVDP53602 400 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 STARD6P59095 220 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 CSNK1G2P78368 415 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 OLR1P78380 273 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 KCNJ10P78508 379 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 RHAGQ02094 409 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 C1orf61Q13536 156 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 TDGQ13569 410 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 FAM214AQ32MH5 1076 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 C18orf63Q68DL7 685 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 RNF165Q6ZSG1 346 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 HIPK1Q86Z02 1210 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 OR4N5Q8IXE1 308 aa9.44□□□□□ -0.9
USP11-201ENST00000218348 PIK3C3Q8NEB9 887 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms