RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CSF2RAP15509 400 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 TRAM2Q15035 370 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 PIP5K1AQ99755 562 aa13.02□□□□□ -0.32
TGFBR3-201ENST00000212355 TRBV2A0A0J9YWF9 115 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 OTOL1A6NHN0 477 aaPredicted RBP13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 C9J4A7 227 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC16A5O15375 505 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 PPM1BO75688 479 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 ERVPABLB-1P60509 514 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 MS4A2Q01362 244 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 KIF18BQ86Y91 864 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 DNAJB8Q8NHS0 232 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 IMP4Q96G21 291 aaKnown RBP13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 DOHHQ9BU89 302 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 INSL6Q9Y581 213 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 INMT-MINDY4F8WBC2 141 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 ADORA3P0DMS8 318 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 INCA1Q0VD86 236 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 C16orf70Q9BSU1 422 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 M0R233 179 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 GKN3PP0CG01 181 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 IL1RNP18510 177 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 OXTRP30559 389 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 ARL3P36405 182 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF423Q2M1K9 1284 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 DUS1LQ6P1R4 473 aaKnown RBP13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 PTERQ96BW5 349 aa13.02□□□□□ -0.33
TGFBR3-201ENST00000212355 CLCA1A8K7I4 914 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 M0R3H8 397 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 MAOBP27338 520 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 HSD17B2P37059 387 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF630Q2M218 657 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 HSD17B12Q53GQ0 312 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 SERPINA12Q8IW75 414 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 OR52P1PQ8NH57 321 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 THAP4Q8WY91 577 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 DPH7Q9BTV6 452 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 CCDC86Q9H6F5 360 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 LRRN3E7EW58 273 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 H2BFMP0C1H6 154 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ENDOUP21128 410 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 MAGEA3P43357 314 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 C6orf120Q7Z4R8 191 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 TSPEARQ8WU66 669 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 LRRN3Q9H3W5 708 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 CLEC4EQ9ULY5 219 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 DOK2O60496 412 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PRDX3P30048 256 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PXNP49023 591 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 HERV-K104P61576 105 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 GPR17Q13304 367 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF829Q3KNS6 432 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF805Q5CZA5 627 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PAGE3Q5JUK9 113 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 METTL2BQ6P1Q9 378 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 SCML4Q8N228 414 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC44A3Q8N4M1 653 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PPIL3Q9H2H8 161 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ARFGEF2Q9Y6D5 1785 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PPP6CO00743 305 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PCDH17O14917 1159 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PEPDP12955 493 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 CFL1P23528 166 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 CD68P34810 354 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 CASRP41180 1078 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 RBM34P42696 430 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 GCGRP47871 477 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 KANSL1Q7Z3B3 1105 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC9B2Q86UD5 537 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 DCAF4L2Q8NA75 395 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 MRM3Q9HC36 420 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 DNAJC15Q9Y5T4 150 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 CCDC163A0A0D9SF12 145 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 AHSA1O95433 338 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 LCKP06239 509 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 LAMP1P11279 417 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PRKCAP17252 672 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 HTR2BP41595 481 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 LEPRP48357 1165 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 FBXO43Q4G163 708 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 SAMD14Q8IZD0 417 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 CYB561A3Q8NBI2 242 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 GLYATL1Q969I3 302 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF382Q96SR6 550 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC39A1Q9NY26 324 aa13.01□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF142P52746 1687 aaPredicted RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 DISC1C4P0D8 188 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 GOSR2O14653 212 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 C1GALT1C1LP0DN25 315 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 BPIP17213 487 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms