RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SP140LQ9H930 580 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 RMI1Q9H9A7 625 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 DCAF13Q9NV06 445 aaKnown RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 HCN3Q9P1Z3 774 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 APOBEC3BQ9UH17 382 aaKnown RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 COL4A1P02462 1669 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 LILRB3O75022 631 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 HMGA1P17096 107 aaKnown RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 ARNTP27540 789 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 SLC6A6P31641 620 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 RSPO2Q6UXX9 243 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 PDZD3Q86UT5 571 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 METTL27Q8N6F8 245 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-223ENST00000640640 SMPDL3BQ92485 455 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 GTF2H4Q92759 462 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 MED28Q9H204 178 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 PELI2Q9HAT8 420 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 DMRT3Q9NQL9 472 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 C14orf105Q9NVL8 296 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 SEC14L4Q9UDX3 406 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 BTNL2Q9UIR0 455 aa16.77■□□□□ 0.28
SCARB2-223ENST00000640640 C1SP09871 688 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 JUNDP17535 347 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 IL1RNP18510 177 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 CDKL1Q00532 357 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 UGT3A2Q3SY77 523 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 OR51G2Q8NGK0 314 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 METTL2AQ96IZ6 378 aaKnown RBP16.77■□□□□ 0.27
SCARB2-223ENST00000640640 AGPAT4Q9NRZ5 378 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 CCL26Q9Y258 94 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 HSPE1-MOB4S4R3N1 261 aa16.77■□□□□ 0.27
SCARB2-223ENST00000640640 PDCD5O14737 125 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 ARL6IP5O75915 188 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 APOL3O95236 402 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 STSP08842 583 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 TGFBR2P37173 567 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 MLLT10P55197 1068 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 PUM1Q14671 1186 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 SLC5A8Q8N695 610 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 DOK4Q8TEW6 326 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 MGLLQ99685 303 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 BARD1Q99728 777 aaKnown RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 GAL3ST1Q99999 423 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 FBRSQ9HAH7 460 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 GRXCR1A8MXD5 290 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 CELP19835 753 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 GMFBP60983 142 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 TXNL4AP83876 142 aaKnown RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 GPN1Q9HCN4 374 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RIMS3Q9UJD0 308 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 MKLN1Q9UL63 735 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 GPR34Q9UPC5 381 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RP1L1Q8IWN7 2480 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 KHNYNO15037 678 aaKnown RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RAB36O95755 333 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 IGLV3-25P01717 112 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 SLC2A2P11168 524 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 CKMT1AP12532 417 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RNH1P13489 461 aaKnown RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 ACSL1P33121 698 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 PRLHRP49683 370 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 NIPAL1Q6NVV3 410 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RFLNAQ6ZTI6 216 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RASGEF1AQ8N9B8 481 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 Q8N9G6 341 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 MINDY2Q8NBR6 621 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 OR51A7Q8NH64 312 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 PIGKQ92643 395 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RIT1Q92963 219 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 LGALS12Q96DT0 336 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 SH3YL1Q96HL8 342 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 ZNF597Q96LX8 424 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 RPP14O95059 124 aaKnown RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 LDOC1O95751 146 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 MAGEA12P43365 314 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 SLC9A3P48764 834 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 LCTLQ6UWM7 567 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 TMIEQ8NEW7 156 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 NARS2Q96I59 477 aaKnown RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 ADAD1Q96M93 576 aaKnown RBP16.76■□□□□ 0.27
SCARB2-223ENST00000640640 ANKMY1Q9P2S6 941 aa16.76■□□□□ 0.27
SCARB2-223ENST00000640640 PORP16435 677 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-223ENST00000640640 SLC6A11P48066 632 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 MC1RQ01726 317 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 NNATQ16517 81 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 NDUFA5Q16718 116 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 FIGLAQ6QHK4 219 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 ZNF550Q7Z398 422 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 LKAAEAR1Q8TD35 194 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 SERINC1Q9NRX5 453 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 PRODH2Q9UF12 536 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 TRIM3O75382 744 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-223ENST00000640640 AGXTP21549 392 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 SELENOWP63302 87 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 TLDC1Q6P9B6 456 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 SERPINA11Q86U17 422 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 GALNT12Q8IXK2 581 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 HS3ST5Q8IZT8 346 aa16.75■□□□□ 0.27
SCARB2-223ENST00000640640 OR2T33Q8NG76 320 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms