RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 BORCS5Q969J3 196 aa10.54□□□□□ -0.72
SCN1B-208ENST00000640135 ZNF559Q9BR84 538 aa10.54□□□□□ -0.72
SCN1B-208ENST00000640135 BOCQ9BWV1 1114 aa10.54□□□□□ -0.72
SCN1B-208ENST00000640135 OSBPL7Q9BZF2 842 aa10.54□□□□□ -0.72
SCN1B-208ENST00000640135 TRNAU1APQ9NX07 287 aaKnown RBP10.54□□□□□ -0.72
SCN1B-208ENST00000640135 H3BUI4 141 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 F7P08709 466 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 XRCC1P18887 633 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 RAET1LQ5VY80 246 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 LARP4Q71RC2 724 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 GAREM2Q75VX8 874 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ERMP1Q7Z2K6 904 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ZNF100Q8IYN0 542 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 CD200R1Q8TD46 325 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 RHBDF1Q96CC6 855 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 AURKBQ96GD4 344 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 SACM1LQ9NTJ5 587 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ING3Q9NXR8 418 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 TEX13CA0A0J9YWL9 993 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ZNF99A8MXY4 864 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 SLC6A8P48029 635 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 C1orf189Q5VU69 101 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 NANOGP8Q6NSW7 305 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 SDR16C5Q8N3Y7 309 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 DRAXINQ8NBI3 349 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 OR5AR1Q8NGP9 310 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 JPH3Q8WXH2 748 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ZNF317Q96PQ6 595 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ACTRT3Q9BYD9 372 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 OR51I1Q9H343 314 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 NANOGQ9H9S0 305 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 LRIT1Q9P2V4 623 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 SEC14L4Q9UDX3 406 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 HS3ST3A1Q9Y663 406 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 TJP1Q07157 1748 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 A0A1W2PRQ8 180 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 FEZF1A0PJY2 475 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 AQP9O43315 295 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 EEDO75530 441 aaKnown RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 OXSR1O95747 527 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 EDNRAP25101 427 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 CTBSQ01459 385 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 TUBB3Q13509 450 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 CLCA4Q14CN2 919 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 TNFAIP8L3Q5GJ75 292 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 SHQ1Q6PI26 577 aaKnown RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 MCATQ8IVS2 390 aaKnown RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 MND1Q9BWT6 205 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 OAZ3Q9UMX2 235 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 BAIAP2Q9UQB8 552 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 H6PDO95479 791 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 PRLP01236 227 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 F8A1P23610 371 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 CTHP32929 405 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 KDELR2P33947 212 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 PXNP49023 591 aaPredicted RBP10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ALDH3A2P51648 485 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 OR2B6P58173 313 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 GAS6Q14393 721 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 PTGR1Q14914 329 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ABRAXAS2Q15018 415 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 USP43Q70EL4 1123 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 COMMD6Q7Z4G1 85 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 SLC15A3Q8IY34 581 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 C16orf78Q8WTQ4 265 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 KCTD7Q96MP8 289 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ZNF778Q96MU6 729 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 CST11Q9H112 138 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 ZNF304Q9HCX3 659 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 RHBDL2Q9NX52 303 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 IL37Q9NZH6 218 aa10.53□□□□□ -0.72
SCN1B-208ENST00000640135 IQCMA0A1B0GVH7 501 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 FTCDNL1E5RQL4 147 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 NELFEP18615 380 aaKnown RBP10.52□□□□□ -0.72
SCN1B-208ENST00000640135 FMO3P31513 532 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 CLDN2P57739 230 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 RACK1P63244 317 aaKnown RBP10.52□□□□□ -0.72
SCN1B-208ENST00000640135 ARF5P84085 180 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 SIX1Q15475 284 aaPredicted RBP10.52□□□□□ -0.72
SCN1B-208ENST00000640135 NDUFAF5Q5TEU4 345 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 FAM69BQ5VUD6 431 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 SATL1Q86VE3 508 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 SGTBQ96EQ0 304 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 NSUN5Q96P11 429 aaKnown RBP10.52□□□□□ -0.72
SCN1B-208ENST00000640135 GORASP1Q9BQQ3 440 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 CXorf21Q9HAI6 301 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 PRSS16Q9NQE7 514 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 LAMP5Q9UJQ1 280 aa10.52□□□□□ -0.72
SCN1B-208ENST00000640135 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.72
SCN1B-208ENST00000640135 PLOD3O60568 738 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 MT-ND5P03915 603 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 FGF4P08620 206 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 HTR1AP08908 422 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 SOX9P48436 509 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 ACTC1P68032 377 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 ACTA1P68133 377 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 E2F2Q14209 437 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 OR4D1Q15615 310 aa10.52□□□□□ -0.73
SCN1B-208ENST00000640135 HSDL2Q6YN16 418 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms