RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PLIN5Q00G26 463 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 ZNF791Q3KP31 576 aaPredicted RBP15.56■□□□□ 0.08
SMN2-216ENST00000638794 RTL6Q6ICC9 239 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 ADGRD1Q6QNK2 874 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 ZDHHC24Q6UX98 284 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 DMRTC2Q8IXT2 367 aaPredicted RBP15.56■□□□□ 0.08
SMN2-216ENST00000638794 ZCCHC7Q8N3Z6 543 aaKnown RBP15.56■□□□□ 0.08
SMN2-216ENST00000638794 SLC22A8Q8TCC7 542 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 DOK4Q8TEW6 326 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 KCTD4Q8WVF5 259 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 TANKQ92844 425 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 FBXL20Q96IG2 436 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 CENPKQ9BS16 269 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 TTYH2Q9BSA4 534 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 SH2D2AQ9NP31 389 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 PHF11Q9UIL8 331 aa15.56■□□□□ 0.08
SMN2-216ENST00000638794 UTP11Q9Y3A2 253 aaKnown RBP15.56■□□□□ 0.08
SMN2-216ENST00000638794 ARHGAP21Q5T5U3 1957 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 SYCE1LA8MT33 242 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 FOXO6A8MYZ6 492 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 AQP7O14520 342 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 DYRK3O43781 588 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 SUSD5O60279 629 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 GLI4P10075 376 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 ALOX15P16050 662 aaPredicted RBP15.55■□□□□ 0.08
SMN2-216ENST00000638794 TLX1P31314 330 aaPredicted RBP15.55■□□□□ 0.08
SMN2-216ENST00000638794 MAN2A2P49641 1150 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 RPS13P62277 151 aaKnown RBP15.55■□□□□ 0.08
SMN2-216ENST00000638794 CAV1Q03135 178 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 NAB1Q13506 487 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 SLC10A1Q14973 349 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 SETDB1Q15047 1291 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 LYPD8Q6UX82 237 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 B3GNT6Q6ZMB0 384 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 OR10Q1Q8NGQ4 319 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 RHEBL1Q8TAI7 183 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 SPACA9Q96E40 222 aaPredicted RBP15.55■□□□□ 0.08
SMN2-216ENST00000638794 ART5Q96L15 291 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 CNPPD1Q9BV87 410 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 ZNF717Q9BY31 904 aaPredicted RBP15.55■□□□□ 0.08
SMN2-216ENST00000638794 LDAHQ9H6V9 325 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 ACTR8Q9H981 624 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 ACAD8Q9UKU7 415 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 ACOT9Q9Y305 439 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 TSC22D4Q9Y3Q8 395 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 ANGPTL3Q9Y5C1 460 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.55■□□□□ 0.08
SMN2-216ENST00000638794 FREM3P0C091 2139 aa15.55■□□□□ 0.08
SMN2-216ENST00000638794 A0A087X1B8 175 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 LRRC14BA6NHZ5 514 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 WASHC1A8K0Z3 465 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 PROM1O43490 865 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 EEDO75530 441 aaKnown RBP15.54■□□□□ 0.08
SMN2-216ENST00000638794 C2P06681 752 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 GFAPP14136 432 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 ENDOUP21128 410 aaKnown RBP15.54■□□□□ 0.08
SMN2-216ENST00000638794 BUD31P41223 144 aaPredicted RBP15.54■□□□□ 0.08
SMN2-216ENST00000638794 HERVK_113P63132 956 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 ERVK-8P63133 956 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 BIKQ13323 160 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 PFKFB4Q16877 469 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 MROH9Q5TGP6 573 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 PRAMEF20Q5VT98 475 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 LIPJQ5W064 366 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 SLC22A10Q63ZE4 541 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 ST13P4Q8IZP2 240 aaPredicted RBP15.54■□□□□ 0.08
SMN2-216ENST00000638794 PAQR8Q8TEZ7 354 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 SARAFQ96BY9 339 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 GAL3ST4Q96RP7 486 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 ERVK-6Q9BXR3 956 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 RAB17Q9H0T7 212 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 ZNF703Q9H7S9 590 aaPredicted RBP15.54■□□□□ 0.08
SMN2-216ENST00000638794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMN2-216ENST00000638794 ERVK-19Q9WJR5 959 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 PCDHGA11Q9Y5H2 935 aa15.54■□□□□ 0.08
SMN2-216ENST00000638794 SETD2Q9BYW2 2564 aaPredicted RBP15.53■□□□□ 0.08
SMN2-216ENST00000638794 A0A0A6YYD5 115 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 A0A0G2JNJ9 132 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 HMX2A2RU54 273 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 GLOD5A6NK44 160 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 H0YIV9 168 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 TMPRSS11DO60235 418 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 WDR1O75083 606 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 GPR75O95800 540 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 HOXD4P09016 255 aaPredicted RBP15.53■□□□□ 0.08
SMN2-216ENST00000638794 RFPL3SP0C7P2 107 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 PTX3P26022 381 aaPredicted RBP15.53■□□□□ 0.08
SMN2-216ENST00000638794 ADH7P40394 386 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 ARFIP1P53367 373 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 ALDH18A1P54886 795 aaKnown RBP15.53■□□□□ 0.08
SMN2-216ENST00000638794 RIPPLY3P57055 190 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 KCNJ2P63252 427 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 GUCY2DQ02846 1103 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 ZNF267Q14586 743 aaPredicted RBP15.53■□□□□ 0.08
SMN2-216ENST00000638794 CPSF6Q16630 551 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMN2-216ENST00000638794 FAM83EQ2M2I3 478 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 SPRED3Q2MJR0 410 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 MRM1Q6IN84 353 aaKnown RBP15.53■□□□□ 0.08
SMN2-216ENST00000638794 RNF111Q6ZNA4 994 aa15.53■□□□□ 0.08
SMN2-216ENST00000638794 SLC29A4Q7RTT9 530 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms