RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RAB38P57729 211 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 DNAJB13P59910 316 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 RCN2Q14257 317 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 KRT72Q14CN4 511 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 ACAP2Q15057 778 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SPRED3Q2MJR0 410 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 CDKL4Q5MAI5 379 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SULT1C3Q6IMI6 304 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SLC25A25Q6KCM7 469 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 GFRALQ6UXV0 394 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 Q6ZPB1 254 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 ABHD13Q7L211 337 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 MTDHQ86UE4 582 aaKnown RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 RPS19BP1Q86WX3 136 aaKnown RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 GPSM1Q86YR5 675 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 TICAM1Q8IUC6 712 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 SLC22A9Q8IVM8 553 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 LAS2Q8IYD9 372 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 LGI4Q8N135 537 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 TMEM151AQ8N4L1 468 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 CPSF7Q8N684 471 aaKnown RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 FAM47BQ8NA70 645 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 OR2L5Q8NG80 312 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 DOK4Q8TEW6 326 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 PTPMT1Q8WUK0 201 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 UBTD2Q8WUN7 234 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 STON2Q8WXE9 905 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 KLHL29Q96CT2 875 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 GPR137Q96N19 417 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 RAB3IPQ96QF0 476 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 MAPKAP1Q9BPZ7 522 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 CD244Q9BZW8 370 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 EHD1Q9H4M9 534 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 CPSF2Q9P2I0 782 aaKnown RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 TINAGQ9UJW2 476 aa7.3□□□□□ -1.24
PNKP-229ENST00000637897 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.3□□□□□ -1.24
PNKP-229ENST00000637897 DCHS2Q6V1P9 2916 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 NME2P1O60361 137 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 NPHS1O60500 1241 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 KERAO60938 352 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 MYO1DO94832 1006 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 CLPSP04118 112 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 KITP10721 976 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 NME2P22392 152 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 ATP5A1P25705 553 aaKnown RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 SERPINB3P29508 390 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 SOX18P35713 384 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 RFC3P40938 356 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 AQP5P55064 265 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 ATP6V0D1P61421 351 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 ID2Q02363 134 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 CHIT1Q13231 466 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 TECRLQ5HYJ1 363 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 CFAP157Q5JU67 520 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 LYPD8Q6UX82 237 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 ASRGL1Q7L266 308 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 MARVELD2Q8N4S9 558 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 B3GNT7Q8NFL0 401 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 OR7G3Q8NG95 312 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 DNAJB8Q8NHS0 232 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 THAP3Q8WTV1 239 aaPredicted RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 EXT2Q93063 718 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 NCLNQ969V3 563 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 PTCD3Q96EY7 689 aaKnown RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 RILPQ96NA2 401 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 TMEM237Q96Q45 408 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 PHF12Q96QT6 1004 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 SORT1Q99523 831 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 UTP23Q9BRU9 249 aaKnown RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 GATA5Q9BWX5 397 aaPredicted RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 NPLQ9BXD5 320 aaPredicted RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 C20orf27Q9GZN8 174 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 REXO4Q9GZR2 422 aaKnown RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 LRMDAQ9H2I8 198 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 OR51B5Q9H339 312 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 CLK4Q9HAZ1 481 aaKnown RBP7.29□□□□□ -1.24
PNKP-229ENST00000637897 ZBTB26Q9HCK0 441 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 PRTFDC1Q9NRG1 225 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 WWOXQ9NZC7 414 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 LRFN1Q9P244 771 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 XPR1Q9UBH6 696 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 SEC14L3Q9UDX4 400 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 VTI1BQ9UEU0 232 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 HAO1Q9UJM8 370 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 RAP2CQ9Y3L5 183 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 MMACHCQ9Y4U1 282 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 POLQO75417 2590 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 NCKAP5O14513 1909 aa7.29□□□□□ -1.24
PNKP-229ENST00000637897 TRBV11-1A0A0K0K1C0 115 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 NPIPA5E9PKD4 350 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 SAP18O00422 153 aaKnown RBP7.28□□□□□ -1.24
PNKP-229ENST00000637897 PPP6CO00743 305 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 PLPP1O14494 284 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 FCHO1O14526 889 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 OR7A17O14581 309 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 TMPRSS11DO60235 418 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 FGF17O60258 216 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 DLX3O60479 287 aa7.28□□□□□ -1.24
PNKP-229ENST00000637897 CCNT2O60583 730 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms