RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CBX6O95503 412 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 OXSR1O95747 527 aaPredicted RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 TOP3BO95985 862 aaKnown RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 ERBB2P04626 1255 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 SERPINA5P05154 406 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 HBQ1P09105 142 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MMP10P09238 476 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 SBK3P0C264 359 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CTSAP10619 480 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 DBTP11182 482 aaKnown RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 ITGAMP11215 1152 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ARSAP15289 507 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PPP3CBP16298 524 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 IL7RP16871 459 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 HK1P19367 917 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CD72P21854 359 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 UQCRC2P22695 453 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PROZP22891 400 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 DPP4P27487 766 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 GSTM2P28161 218 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MAS1LP35410 378 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 TGFBR2P37173 567 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MMP12P39900 470 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 EIF2S3P41091 472 aaKnown RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 MTNR1AP48039 350 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PPP3CCP48454 512 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MMP15P51511 669 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 TPMTP51580 245 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CLCN3P51790 818 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MVDP53602 400 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PEX3P56589 373 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 OR2B6P58173 313 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 BPIFB4P59827 614 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CDK16Q00536 496 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ARHGAP1Q07960 439 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 HYAL1Q12794 435 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 TNK1Q13470 666 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MTM1Q13496 603 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 FHL3Q13643 280 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 FLOT2Q14254 428 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 FGFBP1Q14512 234 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ELAVL3Q14576 367 aaKnown RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 SLC17A1Q14916 467 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 VAMP3Q15836 100 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 SLC15A2Q16348 729 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CARTPTQ16568 116 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 EXOC3L4Q17RC7 722 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 TMEM44Q2T9K0 475 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 NDUFAF6Q330K2 333 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 EDRF1Q3B7T1 1238 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PTCHD3Q3KNS1 767 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CHRFAM7AQ494W8 412 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ATP13A5Q4VNC0 1218 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 SBK1Q52WX2 424 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 TMEM35AQ53FP2 167 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 C5orf47Q569G3 176 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 BEND3Q5T5X7 828 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 LGSNQ5TDP6 509 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MROH9Q5TGP6 573 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 GPR107Q5VW38 600 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 LIPJQ5W064 366 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PAPD7Q5XG87 772 aaKnown RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 TMEM198Q66K66 360 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ADNP2Q6IQ32 1131 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CBLN3Q6UW01 205 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ASCL4Q6XD76 172 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 HSDL2Q6YN16 418 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 IDO2Q6ZQW0 420 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 SEM1Q6ZVN7 128 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 DET1Q7L5Y6 550 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 SCD5Q86SK9 330 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 LDB1Q86U70 411 aaPredicted RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 LHFPL3Q86UP9 236 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 KLBQ86Z14 1044 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 DCUN1D3Q8IWE4 304 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ZDHHC23Q8IYP9 409 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ZBED8Q8IZ13 594 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 ZNF683Q8IZ20 524 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PDIK1LQ8N165 341 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 SYNE4Q8N205 404 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 FBXL16Q8N461 479 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 TEX26Q8N6G2 289 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 DTX3Q8N9I9 347 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PSD4Q8NDX1 1056 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 BEST2Q8NFU1 509 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MAFAQ8NHW3 353 aaPredicted RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 TCP10LQ8TDR4 215 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 WIPF2Q8TF74 440 aaPredicted RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 SOCS4Q8WXH5 440 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 DAZLQ92904 295 aaKnown RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 SCAMP4Q969E2 229 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 MYDGFQ969H8 173 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PHF21AQ96BD5 680 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 PABPC5Q96DU9 382 aaKnown RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 TM4SF19Q96DZ7 209 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 COQ2Q96H96 371 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 CPB2Q96IY4 423 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 FAM84BQ96KN1 310 aaPredicted RBP2.83□□□□□ -1.96
VIM-210ENST00000637053 C3orf30Q96M34 536 aa2.83□□□□□ -1.96
VIM-210ENST00000637053 RNF145Q96MT1 663 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms