RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 RBMXP38159 391 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 NR0B2Q15466 257 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 MS4A13Q5J8X5 152 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 MANEAQ5SRI9 462 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 BCL2L15Q5TBC7 163 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 BATF2Q8N1L9 274 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 SVOPLQ8N434 492 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 OR51L1Q8NGJ5 315 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 C12orf43Q96C57 262 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 CDKN2AIPNLQ96HQ2 116 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 ZBTB26Q9HCK0 441 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF28P17035 718 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 LEG1Q6P5S2 330 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 LILRB2Q8N423 598 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 TMBIM1Q969X1 311 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 TMEM109Q9BVC6 243 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 TGDSO95455 350 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 IFNA5P01569 189 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 SRPRAP08240 638 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 BPHLQ86WA6 291 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 SEC14L1Q92503 715 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 F2RL3Q96RI0 385 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 GATA5Q9BWX5 397 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 OBP2BQ9NPH6 170 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 SGK494L7N484 410 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 MANBAO00462 879 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SGCEO43556 437 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SLC2A1P11166 492 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 TPTEP56180 551 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 OR52E2Q8NGJ4 325 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 GNPDA2Q8TDQ7 276 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SFXN1Q9H9B4 322 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 L2HGDHQ9H9P8 463 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SORCS3Q9UPU3 1222 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 RAP2AP10114 183 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF616Q08AN1 781 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 TMEM201Q5SNT2 666 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ATPAF1Q5TC12 328 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CILP2Q8IUL8 1156 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 FCAMRQ8WWV6 532 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CLEC4DQ8WXI8 215 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CENPNQ96H22 339 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 RAD9AQ99638 391 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ANKRD10Q9NXR5 420 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 PTGDR2Q9Y5Y4 395 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 C2CD4BA6NLJ0 364 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CXorf49A8MYA2 514 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 EDF1O60869 148 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 OR51T1Q8NGJ9 327 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 PTERQ96BW5 349 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SPHK2Q9NRA0 654 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CMAHPQ9Y471 501 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 MST1RQ04912 1400 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ANKRD66B4E2M5 251 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ABCB7O75027 752 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CBX7O95931 251 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 LRIF1Q5T3J3 769 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 MEX3BQ6ZN04 569 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 TMPRSS12Q86WS5 348 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 NRROSQ86YC3 692 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 WDR92Q96MX6 357 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CNTN6Q9UQ52 1028 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 DPP4P27487 766 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SIM1P81133 766 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 HES1Q14469 280 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 C14orf80Q86SX3 495 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF681Q96N22 645 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 KLHL9Q9P2J3 617 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ACSL6Q9UKU0 697 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 VSTM2BA6NLU5 285 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 LILRB5O75023 590 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SIRPAP78324 504 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF584Q8IVC4 421 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF845Q96IR2 970 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 MFRPQ9BY79 579 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 SYNPO2LQ9H987 977 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 CA5BQ9Y2D0 317 aa17.1■□□□□ 0.33
CACNA1A-227ENST00000636549 FER1L4A9Z1Z3 1794 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 BORCS7-ASMTA0A0B4J1R7 106 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 VNN1O95497 513 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 SLC18A1P54219 525 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 CAMK2DQ13557 499 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 NKAIN2Q5VXU1 208 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 NCBP2-AS2Q69YL0 99 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 FAM160A2Q8N612 972 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 BORCS7Q96B45 105 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 ANKRD27Q96NW4 1050 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 DPAGT1Q9H3H5 408 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 LSM5Q9Y4Y9 91 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 ARAFP10398 606 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 PHC2Q8IXK0 858 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 TRMOQ9BU70 441 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 EFCAB7A8K855 629 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 K7ERQ8 282 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms