RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 OR5AK3PQ8NH89 298 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 DNAJA4Q8WW22 397 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 LINC01599Q8WXQ3 324 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 TMEM203Q969S6 136 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 PDXPQ96GD0 296 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 OR4K3Q96R72 315 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 NLNQ9BYT8 704 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 TMEM161AQ9NX61 479 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 TESQ9UGI8 421 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 MBD1Q9UIS9 605 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 ADAM30Q9UKF2 790 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 HSPB11Q9Y547 144 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 TMEM129A0AVI4 362 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 SNTNA6NMZ2 147 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 FAM157BP0CG42 384 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 HMGA1P17096 107 aaKnown RBP14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 UQCRC2P22695 453 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 SSTR4P31391 388 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 MAPK9P45984 424 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 SMAD3P84022 425 aaKnown RBP14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 DUSP6Q16828 381 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 CNIH2Q6PI25 160 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 SERPINA13PQ6UXR4 307 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 CEACAM20Q6UY09 585 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF782Q6ZMW2 699 aaPredicted RBP14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 COMMD6Q7Z4G1 85 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 DNAJB7Q7Z6W7 309 aaPredicted RBP14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 OR56A3Q8NH54 315 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 WFDC5Q8TCV5 224 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 UFD1Q92890 307 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 CIDECQ96AQ7 238 aaPredicted RBP14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 ZBED6CLQ96FA7 236 aaPredicted RBP14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 QRFPRQ96P65 431 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 COQ7Q99807 217 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 TVP23BQ9NYZ1 205 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 KCNN3Q9UGI6 736 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 ASB4Q9Y574 426 aa14.08□□□□□ -0.15
CACNA1A-220ENST00000635988 FRMPD3Q5JV73 1810 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 TEX51A0A1B0GUA7 166 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 SGK494L7N484 410 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 QSOX1O00391 747 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 CYP2A6P11509 494 aaPredicted RBP14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 ARSBP15848 533 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 HLA-FP30511 346 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 GABRA5P31644 462 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 ETV5P41161 510 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 SPINT3P49223 89 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 ETV1P50549 477 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 SNRPD1P62314 119 aaKnown RBP14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 FKBP1BP68106 108 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 SEC23BQ15437 767 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 BICRALQ6AI39 1079 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 FAM71E1Q6IPT2 247 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 ADNP2Q6IQ32 1131 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 KIAA1211LQ6NV74 962 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 MZT2AQ6P582 158 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 OR52P1PQ8NH57 321 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 C16orf78Q8WTQ4 265 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 AKAP1Q92667 903 aaKnown RBP eCLIP14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 ECHDC3Q96DC8 303 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 TMEM43Q9BTV4 400 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 MRPS18AQ9NVS2 196 aaKnown RBP14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 NLKQ9UBE8 527 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 COMMD3Q9UBI1 195 aa14.08□□□□□ -0.16
CACNA1A-220ENST00000635988 A0A1W2PQ67 120 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 TLX2O43763 284 aaPredicted RBP14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 GAAP10253 952 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 CFL1P23528 166 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 CCND3P30281 292 aaPredicted RBP14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 SEMG2Q02383 582 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 TAF12Q16514 161 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 SYT14P1Q58G82 188 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 PGBD2Q6P3X8 592 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 CD300LDQ6UXZ3 194 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 AMIGO1Q86WK6 493 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 HS6ST3Q8IZP7 471 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 LINC00471Q8N535 108 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 A4GALTQ9NPC4 353 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 MCUBQ9NWR8 336 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 ZSCAN32Q9NX65 697 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 SF3B6Q9Y3B4 125 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 CLCA3PQ9Y6N3 262 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 PLXNB3Q9ULL4 1909 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 PIPSLA2A3N6 862 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 WASHC1A8K0Z3 465 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 CASKO14936 926 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 AKR7A2O43488 359 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 IGFBP1P08833 259 aaPredicted RBP14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 CYBAP13498 195 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 LHCGRP22888 699 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 EVX1P49640 407 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 RPS25P62851 125 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 RAB40BQ12829 278 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 MPEG1Q2M385 716 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 LAMTOR1Q6IAA8 161 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 TCTN3Q6NUS6 607 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 SLCO4C1Q6ZQN7 724 aa14.07□□□□□ -0.16
CACNA1A-220ENST00000635988 TMEM145Q8NBT3 493 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms