RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ZNF276Q8N554 614 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TEX26Q8N6G2 289 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MAB21L3Q8N8X9 362 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 PROKR1Q8TCW9 393 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SUSD6Q92537 303 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 FUBP1Q96AE4 644 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 AKR1E2Q96JD6 320 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 NACC1Q96RE7 527 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 HAPLN3Q96S86 360 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 PAPOLGQ9BWT3 736 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 POLDIP3Q9BY77 421 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TRIM9Q9C026 710 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 RACGAP1Q9H0H5 632 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TKTL2Q9H0I9 626 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MTHFD2LQ9H903 347 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 VIPAS39Q9H9C1 493 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SLC38A10Q9HBR0 1119 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SLC39A2Q9NP94 309 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SAMSN1Q9NSI8 373 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 C19orf12Q9NSK7 152 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 C20orf96Q9NUD7 363 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SPATA6Q9NWH7 488 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 GAR1Q9NY12 217 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ENOPH1Q9UHY7 261 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 EIF3LQ9Y262 564 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MRPS17Q9Y2R5 130 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 REXO2Q9Y3B8 237 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 RNF115Q9Y4L5 304 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ATG4BQ9Y4P1 393 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ALS2Q96Q42 1657 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TNRC6CQ9HCJ0 1690 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TMEM265A0A087WTH1 108 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 NPEPPSL1A6NEC2 478 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MANSC4A6NHS7 340 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ERVV-2B6SEH9 535 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 NBR2O15453 112 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TIMM8AO60220 97 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 PSIP1O75475 530 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 AVPP01185 164 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 GASTP01350 101 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TFP02787 698 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 GNAO1P09471 354 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 GIMD1P0DJR0 217 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 IRF1P10914 325 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 DBTP11182 482 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 VPREB1P12018 145 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 UQCRC1P31930 480 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 OTX1P32242 354 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ZNF134P52741 427 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 PRKAG1P54619 331 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 VSNL1P62760 191 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 TXNL4AP83876 142 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 FASTKD3Q14CZ7 662 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ITPRIPL2Q3MIP1 535 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 AASDHQ4L235 1098 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 C6orf10Q5SRN2 563 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 KHDRBS2Q5VWX1 349 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 PAPD7Q5XG87 772 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 CD276Q5ZPR3 534 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 IL17RELQ6ZVW7 336 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 CLVS1Q8IUQ0 354 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 BCL6BQ8N143 479 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ENGASEQ8NFI3 743 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 M1APQ8TC57 530 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ACTL9Q8TC94 416 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SLC38A4Q969I6 547 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 NTAN1Q96AB6 310 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 CCDC124Q96CT7 223 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 COX4I2Q96KJ9 171 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 GLT1D1Q96MS3 346 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MS4A10Q96PG2 267 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MDFIQ99750 246 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MED10Q9BTT4 135 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 WRAP53Q9BUR4 548 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 OR10A5Q9H207 317 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SLC38A1Q9H2H9 487 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 FOXP1Q9H334 677 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 NXF3Q9H4D5 531 aaKnown RBP4.58□□□□□ -1.68
SDCBP-213ENST00000630925 MYOZ2Q9NPC6 264 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 CNGB3Q9NQW8 809 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 POT1Q9NUX5 634 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 SMOXQ9NWM0 555 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 C3orf18Q9UK00 162 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 GINS2Q9Y248 185 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 KLK4Q9Y5K2 254 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 PTGDR2Q9Y5Y4 395 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 ACTL7BQ9Y614 415 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 NPTNQ9Y639 398 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 CNTNAP1P78357 1384 aa4.58□□□□□ -1.68
SDCBP-213ENST00000630925 NAIPQ13075 1403 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 HEPACAM2A8MVW5 462 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 A8MX80 341 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 TMEM238C9JI98 176 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 MKRN2OSH3BPM6 223 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 LEFTY2O00292 366 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 DSCR3O14972 297 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 MID1O15344 667 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 FLRT2O43155 660 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 UGDHO60701 494 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms