RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 SRFBP1Q8NEF9 429 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 LILRB4Q8NHJ6 448 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 C14orf79Q96F83 325 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 CDK15Q96Q40 435 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 FAM173AQ9BQD7 235 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 ROGDIQ9GZN7 287 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 TP63Q9H3D4 680 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 NINJ2Q9NZG7 142 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 SPRR3Q9UBC9 169 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 UTP11Q9Y3A2 253 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 HRNRQ86YZ3 2850 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 ZFHX3Q15911 3703 aa12.48□□□□□ -0.41
SOX2-OT-241ENST00000626948 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 EXPH5Q8NEV8 1989 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 KIAA1549Q9HCM3 1950 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 KDM4EB2RXH2 506 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 H0YIV9 168 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 KLHL2O95198 593 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 GBAP04062 536 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 SBK3P0C264 359 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 CT62P0C5K7 136 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 CASQ1P31415 396 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 ADH7P40394 386 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 MAGEA12P43365 314 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 SLC37A1P57057 533 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 PLGLB1Q02325 96 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 CAV1Q03135 178 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 PMPCAQ10713 525 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 NAB1Q13506 487 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 RCN2Q14257 317 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 CPSF6Q16630 551 aaKnown RBP eCLIP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 PRAMEF20Q5VT98 475 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 LIPJQ5W064 366 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 TMEM64Q6YI46 380 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 RPS27LQ71UM5 84 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 GPR180Q86V85 440 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 ZNF441Q8N8Z8 693 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 L3MBTL4Q8NA19 623 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 OR52B6Q8NGF0 335 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 NUBPLQ8TB37 319 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 PAQR8Q8TEZ7 354 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 UBE2E3Q969T4 207 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 RGMAQ96B86 450 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 FBXL20Q96IG2 436 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 CNPPD1Q9BV87 410 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 RUBCNLQ9H714 662 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 DDX31Q9H8H2 851 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 IL1RL2Q9HB29 575 aa12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 TEX10Q9NXF1 929 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 CHCHD2Q9Y6H1 151 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-241ENST00000626948 VPS13CQ709C8 3753 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 SPG11Q96JI7 2443 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 A0A087X1B8 175 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 A0A096LPK6 155 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ATP6AP2A0A1C7CYW4 349 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 SYNDIG1LA6NDD5 238 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 FAM90A27PA6NNH2 459 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 PPP6CO00743 305 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 PGRMC2O15173 223 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ATP6AP2O75787 350 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 LRATO95237 230 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 AIFM1O95831 613 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ALOX15P16050 662 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ECHS1P30084 290 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ALDH18A1P54886 795 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 HERVK_113P63132 956 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ERVK-8P63133 956 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 TLE4Q04727 773 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 GTF2H2Q13888 395 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ACAP2Q15057 778 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 EBPQ15125 230 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 GTF2H2CQ6P1K8 395 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 FAM47EQ6ZV65 393 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 SEM1Q6ZVN7 128 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ST13P4Q8IZP2 240 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 FAM109AQ8N4B1 249 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 TMEM151AQ8N4L1 468 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ISL2Q96A47 359 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 SGCZQ96LD1 299 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 DGAT2Q96PD7 388 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 SMC6Q96SB8 1091 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ERVK-6Q9BXR3 956 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 FUT8Q9BYC5 575 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 RAB17Q9H0T7 212 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 IPPKQ9H8X2 491 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 SACM1LQ9NTJ5 587 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 DMGDHQ9UI17 866 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 CNOT11Q9UKZ1 510 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ERVK-19Q9WJR5 959 aa12.46□□□□□ -0.41
SOX2-OT-241ENST00000626948 ARHGAP21Q5T5U3 1957 aa12.45□□□□□ -0.42
SOX2-OT-241ENST00000626948 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
SOX2-OT-241ENST00000626948 AQP7O14520 342 aa12.45□□□□□ -0.42
SOX2-OT-241ENST00000626948 GPR75O95800 540 aa12.45□□□□□ -0.42
SOX2-OT-241ENST00000626948 FBXO45P0C2W1 286 aa12.45□□□□□ -0.42
SOX2-OT-241ENST00000626948 FAM58BPP0C7Q3 252 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms