RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TEKT2Q9UIF3 430 aa11.87□□□□□ -0.51
PNKP-217ENST00000625216 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
PNKP-217ENST00000625216 TSC22D4Q9Y3Q8 395 aa11.87□□□□□ -0.51
PNKP-217ENST00000625216 TRAV17A0A0B4J275 112 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 SH3BGRLO75368 114 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 AGFG2O95081 481 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 TBX6O95947 436 aaPredicted RBP11.86□□□□□ -0.51
PNKP-217ENST00000625216 FHP07954 510 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 GPX3P22352 226 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 JAK1P23458 1154 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 EFNA3P52797 238 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 ARG2P78540 354 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 EMX2Q04743 252 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 KIAA0040Q15053 153 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 NSDHLQ15738 373 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 EXT1Q16394 746 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 DEFB134Q4QY38 66 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 RFTN2Q52LD8 501 aaPredicted RBP11.86□□□□□ -0.51
PNKP-217ENST00000625216 ABHD17BQ5VST6 288 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 GK5Q6ZS86 529 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 ANKRD37Q7Z713 158 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 M1APQ8TC57 530 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 UTP15Q8TED0 518 aaKnown RBP11.86□□□□□ -0.51
PNKP-217ENST00000625216 UBE2E3Q969T4 207 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 CMTM7Q96FZ5 175 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 PEX11GQ96HA9 241 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 FCRL1Q96LA6 429 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 RHBGQ9H310 441 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 BRF2Q9HAW0 419 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 LANCL2Q9NS86 450 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 C1orf109Q9NX04 203 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 CSAG2Q9Y5P2 127 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 GPR45Q9Y5Y3 372 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
PNKP-217ENST00000625216 FOXE1O00358 373 aaPredicted RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 CDK2AP1O14519 115 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 SLC22A2O15244 555 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 CHST10O43529 356 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 DDAH2O95865 285 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 ZNF888P0CJ79 500 aaPredicted RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 SMIM10L1P0DMW3 83 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 ITGAMP11215 1152 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 PIK3CBP42338 1070 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 CPA2P48052 419 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 MRPL19P49406 292 aaKnown RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 TNFSF10P50591 281 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 NCALDP61601 193 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 STXBP1P61764 594 aaKnown RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 RHAGQ02094 409 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 ACTN3Q08043 901 aaPredicted RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 ELOAQ14241 798 aaKnown RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 GSTA3Q16772 222 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 SMU1Q2TAY7 513 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 EIF2S3LQ2VIR3 472 aaKnown RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 C10orf62Q5T681 223 aaPredicted RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 IL23RQ5VWK5 629 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 H3F3CQ6NXT2 135 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 YTHDF3Q7Z739 585 aaKnown RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 SIRT6Q8N6T7 355 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 POU5F2Q8N7G0 328 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 OR9I1Q8NGQ6 314 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 OR1N1Q8NGS0 311 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 CREB3L4Q8TEY5 395 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 SMIM10Q96HG1 83 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 ZNF354BQ96LW1 612 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 PSMG3-AS1Q96PY0 264 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 LPAR4Q99677 370 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 MS4A8Q9BY19 250 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 MRPL1Q9BYD6 325 aaKnown RBP11.85□□□□□ -0.51
PNKP-217ENST00000625216 BRINP2Q9C0B6 783 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 AICDAQ9GZX7 198 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 ASIC5Q9NY37 505 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 STMN3Q9NZ72 180 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 PPT2Q9UMR5 302 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 DLGAP4Q9Y2H0 992 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 CNTRLQ7Z7A1 2325 aa11.85□□□□□ -0.51
PNKP-217ENST00000625216 ANKUB1A6NFN9 424 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 ZNF860A6NHJ4 632 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 C9JVG2 144 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 PSMD12O00232 456 aaPredicted RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 SEC22BO75396 215 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 TGFB1P01137 390 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 GP1BBP13224 206 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 RNH1P13489 461 aaKnown RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 IDO1P14902 403 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 ADSLP30566 484 aaPredicted RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 SERPINB1P30740 379 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 ZFP36L2P47974 494 aaKnown RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 NME5P56597 212 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 STX1BP61266 288 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 PHEXP78562 749 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 TBL3Q12788 808 aaKnown RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 HYAL2Q12891 473 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 MRPL49Q13405 166 aaKnown RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 INAQ16352 499 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 BTBD16Q32M84 506 aa11.84□□□□□ -0.51
PNKP-217ENST00000625216 PDCD4Q53EL6 469 aaKnown RBP11.84□□□□□ -0.51
PNKP-217ENST00000625216 PAOXQ6QHF9 649 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms