RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ZNF8P17098 575 aaPredicted RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 HSD3B2P26439 372 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 TIA1P31483 386 aaKnown RBP eCLIP13.42□□□□□ -0.26
LDB3-209ENST00000623056 CHI3L1P36222 383 aaPredicted RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 AP1S2P56377 157 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 BCL2L1Q07817 233 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 DUSP4Q13115 394 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 SP140Q13342 867 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 IRF5Q13568 498 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 SLC5A12Q1EHB4 618 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 ATP13A5Q4VNC0 1218 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 OR2G6Q5TZ20 316 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 FAM92BQ6ZTR7 304 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 THOC6Q86W42 341 aaKnown RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 CBARPQ8N350 705 aaPredicted RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 TRPV1Q8NER1 839 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 C19orf43Q9BQ61 176 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 BRF2Q9HAW0 419 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 ATP6V1HQ9UI12 483 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 MGAT4BQ9UQ53 548 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 Q9Y3F1 56 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 CDH10Q9Y6N8 788 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 NINQ8N4C6 2090 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 H0YIV9 168 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 TMEM189-UBE2V1I3L0A0 370 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 BTN3A3O00478 584 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 SLC30A4O14863 429 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 INPPL1O15357 1258 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 TLX2O43763 284 aaPredicted RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 PRKYO43930 277 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 OR7A10O76100 309 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 OR56A5P0C7T3 313 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 MPC1LP0DKB6 136 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 ARAFP10398 606 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 TNNI3P19429 210 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 OPRD1P41143 372 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 INPP1P49441 399 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 AGFG1P52594 562 aaKnown RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 POU6F2P78424 691 aaPredicted RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 FABP5Q01469 135 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 ANGPT1Q15389 498 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 MPPE1Q53F39 396 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 ADGRF1Q5T601 910 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 PXDC1Q5TGL8 231 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 GRHL2Q6ISB3 625 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 METAP1DQ6UB28 335 aaPredicted RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 GLB1LQ6UWU2 654 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
LDB3-209ENST00000623056 WBP2Q969T9 261 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
LDB3-209ENST00000623056 POLR2J3Q9H1A7 115 aaKnown RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 PPIL3Q9H2H8 161 aaKnown RBP13.42□□□□□ -0.26
LDB3-209ENST00000623056 REEP4Q9H6H4 257 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 AUP1Q9Y679 476 aa13.42□□□□□ -0.26
LDB3-209ENST00000623056 OR6C75A6NL08 312 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 CASKO14936 926 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 SYN3O14994 580 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 SLC16A5O15375 505 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 COCHO43405 550 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 ELAVL4P26378 380 aaKnown RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 EVX1P49640 407 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 WNT4P56705 351 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 TAGLNQ01995 201 aaKnown RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 SPIN4Q56A73 249 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 SYT14P1Q58G82 188 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 TEX261Q6UWH6 196 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 RSPO2Q6UXX9 243 aaPredicted RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 TIGD4Q8IY51 512 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 OR8H3Q8N146 312 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 APOBEC4Q8WW27 367 aaKnown RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 GATAD2BQ8WXI9 593 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 CREB3L1Q96BA8 519 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 NACC2Q96BF6 587 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 CXorf40BQ96DE9 158 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 ATF6BQ99941 703 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 TESQ9UGI8 421 aaKnown RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 U3KQ87 197 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 PLXNB3Q9ULL4 1909 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 NPIPB15A6NHN6 443 aaPredicted RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 SGK494L7N484 410 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 SMAD6O43541 496 aaKnown RBP13.41□□□□□ -0.26
LDB3-209ENST00000623056 SEMA7AO75326 666 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 LHCGRP22888 699 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 AVPR1BP47901 424 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 MC1RQ01726 317 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 TPBGQ13641 420 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 MPEG1Q2M385 716 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 KLHL22Q53GT1 634 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 CLLU1OSQ5K130 101 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 DCST1Q5T197 706 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 GHDCQ8N2G8 530 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 FAM26EQ8N5C1 309 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 PLA2G15Q8NCC3 412 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 ZNF680Q8NEM1 530 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 PLD4Q96BZ4 506 aa13.41□□□□□ -0.26
LDB3-209ENST00000623056 C17orf62Q9BQA9 187 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms