RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 KDM4DQ6B0I6 523 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 MAMSTRQ6ZN01 415 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 CYP4Z1Q86W10 505 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 FAM20CQ8IXL6 584 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 MMP21Q8N119 569 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 CARFQ8N187 725 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 ZNF786Q8N393 782 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 PIK3C3Q8NEB9 887 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 ADAMTS16Q8TE57 1224 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 ADAMTS18Q8TE60 1221 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 PROX1Q92786 737 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 ZNF300Q96RE9 604 aaPredicted RBP15.45■□□□□ 0.06
LDB3-208ENST00000623007 CCDC3Q9BQI4 270 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 PSD2Q9BQI7 771 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 TPSD1Q9BZJ3 242 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 TOR3AQ9H497 397 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 BCL2L10Q9HD36 194 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 VCX3AQ9NNX9 186 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 EXD2Q9NVH0 621 aa15.45■□□□□ 0.06
LDB3-208ENST00000623007 A0A0G2JN53 185 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 A0A0J9YVX5 310 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 hCG_2039718K7EN88 272 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 GCM2O75603 506 aaPredicted RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 PGM3O95394 542 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 LINGO3P0C6S8 592 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 MATN1P21941 496 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 CDK9P50750 372 aaKnown RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 RPL6Q02878 288 aaKnown RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 WDR45BQ5MNZ6 344 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 LRRC25Q8N386 305 aaPredicted RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 HORMAD2Q8N7B1 307 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 OR4K14Q8NGD5 310 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 SLC38A5Q8WUX1 472 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 JPH3Q8WXH2 748 aaPredicted RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 HDAC2Q92769 488 aaKnown RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 TAMM41Q96BW9 452 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 APOL4Q9BPW4 351 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 CHRNA10Q9GZZ6 450 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 NTMQ9P121 344 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 EPHA6Q9UF33 1036 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 DAPP1Q9UN19 280 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 NUP214P35658 2090 aaPredicted RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 LOC100130705A0A1B0GUX0 176 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 TRIM64CA6NLI5 447 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 HMGN4O00479 90 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 IL9P15248 144 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 AQP1P29972 269 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 EPHA4P54764 986 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 NDUFA9Q16795 377 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 ATAD3BQ5T9A4 648 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 ALDH16A1Q8IZ83 802 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 LGI4Q8N135 537 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 SIX5Q8N196 739 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 AMER3Q8N944 861 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 KCT2Q8NC54 265 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 C7orf57Q8NEG2 295 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 TANKQ92844 425 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 DGCR14Q96DF8 476 aaKnown RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 TMEM19Q96HH6 336 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 PIP5K1AQ99755 562 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 RAB33BQ9H082 229 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 TCEAL2Q9H3H9 227 aaPredicted RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 NDUFAF4Q9P032 175 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 PDP1Q9P0J1 537 aaPredicted RBP15.44■□□□□ 0.06
LDB3-208ENST00000623007 PTGFRNQ9P2B2 879 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 RAB23Q9ULC3 237 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 ENPP4Q9Y6X5 453 aa15.44■□□□□ 0.06
LDB3-208ENST00000623007 MDC1Q14676 2089 aaKnown RBP15.43■□□□□ 0.06
LDB3-208ENST00000623007 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 A0A0G2JPF8 293 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 HNRNPCL2B2RXH8 293 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 HNRNPCL3B7ZW38 293 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 H0YGG7 62 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 TNFRSF11BO00300 401 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 PLOD2O00469 737 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 CASC3O15234 703 aaKnown RBP15.43■□□□□ 0.06
LDB3-208ENST00000623007 CTSVO60911 334 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 UBXN7O94888 489 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 TFAP2AP05549 437 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 BCHEP06276 602 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 HNRNPCL4P0DMR1 293 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 CXCL12P48061 93 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 HMGA2P52926 109 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 CRYBA2P53672 197 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 GABARAPL2P60520 117 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 ARF3P61204 181 aaPredicted RBP15.43■□□□□ 0.06
LDB3-208ENST00000623007 CSNK2BP67870 215 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 IQCCQ4KMZ1 466 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 FAHD1Q6P587 224 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 TNFAIP8L2Q6P589 184 aaPredicted RBP15.43■□□□□ 0.06
LDB3-208ENST00000623007 USP53Q70EK8 1073 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 LINC00471Q8N535 108 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 CSNK1A1LQ8N752 337 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 ATG16L2Q8NAA4 619 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 SUN3Q8TAQ9 357 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 GIPC3Q8TF64 312 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 RLN3Q8WXF3 142 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 CNRIP1Q96F85 164 aaPredicted RBP15.43■□□□□ 0.06
LDB3-208ENST00000623007 TCTN2Q96GX1 697 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 ZNF681Q96N22 645 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms