RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PSPHP78330 225 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 ERV3-1Q14264 604 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 GPR19Q15760 415 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 TRIM60Q495X7 471 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 ARMCX4Q5H9R4 360 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 PABPC1L2AQ5JQF8 200 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 OR4F3Q6IEY1 312 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 SLC16A13Q7RTY0 426 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 SETD7Q8WTS6 366 aaKnown RBP11.88□□□□□ -0.51
LITAF-221ENST00000622633 SLC38A4Q969I6 547 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 ZDHHC12Q96GR4 267 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 ZNF285Q96NJ3 590 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 RBP7Q96R05 134 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 DPCDQ9BVM2 203 aaPredicted RBP11.88□□□□□ -0.51
LITAF-221ENST00000622633 WNT5BQ9H1J7 359 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 RIBC2Q9H4K1 309 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 RNF167Q9H6Y7 350 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 SDHAF2Q9NX18 166 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 ABCG2Q9UNQ0 655 aa11.88□□□□□ -0.51
LITAF-221ENST00000622633 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 MYO1GB0I1T2 1018 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 RFXANKO14593 260 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 WNT9AO14904 365 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
LITAF-221ENST00000622633 URODP06132 367 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 SDC1P18827 310 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 IGFBP5P24593 272 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 RYKP34925 604 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 DCDC1P59894 354 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 SLC35A2P78381 396 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 FGFBP1Q14512 234 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 DMC1Q14565 340 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 SSPNQ14714 243 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 SYT16Q17RD7 645 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 CPZQ66K79 652 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 TXNDC8Q6A555 127 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 ANKRD54Q6NXT1 300 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 UBE2R2Q712K3 238 aaPredicted RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 DNAJB7Q7Z6W7 309 aaPredicted RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 ABI3BPQ7Z7G0 1075 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 TMEM150AQ86TG1 271 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 ZNF461Q8TAF7 563 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 COQ8BQ96D53 544 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 PAWRQ96IZ0 340 aaKnown RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 APOLD1Q96LR9 279 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 CMTM3Q96MX0 182 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 C11orf54Q9H0W9 315 aaPredicted RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 DUSP21Q9H596 190 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 ZNF768Q9H5H4 540 aaKnown RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 MCUBQ9NWR8 336 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 UBQLN2Q9UHD9 624 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 MBD1Q9UIS9 605 aaPredicted RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 BACE2Q9Y5Z0 518 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 OR2A25A4D2G3 310 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 KRBOX1C9JBD0 128 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 APOL3O95236 402 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 ANGPTL1O95841 491 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 IFNA7P01567 189 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 HOXB9P17482 250 aaPredicted RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 GADD45AP24522 165 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 TNFSF8P32971 234 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 TM4SF4P48230 202 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 CSNK2BP67870 215 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 B4GALNT1Q00973 533 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 ABHD18Q0P651 414 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 ASAH1Q13510 395 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 COL28A1Q2UY09 1125 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 ATP13A5Q4VNC0 1218 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 PAN3Q58A45 887 aaKnown RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 DGKKQ5KSL6 1271 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 SLC27A4Q6P1M0 643 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 SHQ1Q6PI26 577 aaKnown RBP11.87□□□□□ -0.51
LITAF-221ENST00000622633 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 TPGS1Q6ZTW0 290 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 LNX2Q8N448 690 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 TET1Q8NFU7 2136 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 MYOCQ99972 504 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 ASAH2Q9NR71 780 aa11.87□□□□□ -0.51
LITAF-221ENST00000622633 KCNE1BA0A087WTH5 132 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 FAM74A7A6NL05 159 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 PRSS47A8MTI9 375 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 PRAMEF4O60810 478 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 ZNF821O75541 412 aaPredicted RBP11.86□□□□□ -0.51
LITAF-221ENST00000622633 MPC2O95563 127 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 KLK3P07288 261 aaPredicted RBP11.86□□□□□ -0.51
LITAF-221ENST00000622633 H2AFB1P0C5Y9 115 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 H2AFB2P0C5Z0 115 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 PRPS2P11908 318 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 IL1RNP18510 177 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 ITPKAP23677 461 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 TIE1P35590 1138 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 GPX4P36969 197 aaPredicted RBP11.86□□□□□ -0.51
LITAF-221ENST00000622633 NSG1P42857 185 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 DAPP51397 102 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 RIDAP52758 137 aaKnown RBP11.86□□□□□ -0.51
LITAF-221ENST00000622633 HSF2Q03933 536 aa11.86□□□□□ -0.51
LITAF-221ENST00000622633 HFEQ30201 348 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms