RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 A0A096LPI6 279 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 A0A1W2PS29 197 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 MEN1O00255 615 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 NPPAP01160 153 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 GSNP06396 782 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 AGXTP21549 392 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 PPP2R1BP30154 601 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 FRKP42685 505 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 CDKN2CP42773 168 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 TRPC1P48995 793 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 XKP51811 444 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 NCBP2P52298 156 aaKnown RBP eCLIP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 MFSD4BQ5TF39 518 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 DLEU7Q6UYE1 221 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 ZNF551Q7Z340 670 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 SAMD14Q8IZD0 417 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 DEFB107AQ8IZN7 70 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 DNAJB8Q8NHS0 232 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 ZFP28Q8NHY6 868 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 PAIP1Q9H074 479 aaKnown RBP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 MMADHCQ9H3L0 296 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 ACSS1Q9NUB1 689 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 CTSFQ9UBX1 484 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 ZNF282Q9UDV7 671 aaPredicted RBP16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 MYO1GB0I1T2 1018 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 FXYD1O00168 92 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 NVLO15381 856 aaKnown RBP16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 ERN1O75460 977 aaKnown RBP16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 GPR75O95800 540 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 KLK3P07288 261 aaPredicted RBP16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 IL10P22301 178 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 PSME3P61289 254 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 HBA1P69905 142 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 DUSP2Q05923 314 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 HSPB3Q12988 150 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 DNAL1Q4LDG9 190 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 VWA2Q5GFL6 755 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 LRIF1Q5T3J3 769 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 TMEM164Q5U3C3 297 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 ZNF621Q6ZSS3 439 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 MARCH9Q86YJ5 346 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 ZC3H7AQ8IWR0 971 aaKnown RBP16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 CCDC116Q8IYX3 515 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 PGAM4Q8N0Y7 254 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 ADAMTS14Q8WXS8 1223 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 OR5P2Q8WZ92 322 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 ANKRD9Q96BM1 317 aaPredicted RBP16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 ZNF681Q96N22 645 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 LRFN5Q96NI6 719 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 AMDHD1Q96NU7 426 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 GLIPR2Q9H4G4 154 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 LANCL2Q9NS86 450 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 SLC6A13Q9NSD5 602 aa16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 IFT80Q9P2H3 777 aaPredicted RBP16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.74■□□□□ 0.27
PTCHD3-202ENST00000622555 MYOCOSA0A1B0GUC4 107 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 CTNSO60931 367 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 STK17BO94768 372 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 BMP10O95393 424 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 CPMP14384 443 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 MPIP34949 423 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 HSD17B7P56937 341 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 BTG2P78543 158 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 OCA2Q04671 838 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 STX4Q12846 297 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 CEBPEQ15744 281 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 GTDC1Q4AE62 458 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 MINDY4Q4G0A6 757 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 PRSS58Q8IYP2 241 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 LRRC25Q8N386 305 aaPredicted RBP16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 GALNT15Q8N3T1 639 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 GALNT6Q8NCL4 622 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 CGREF1Q99674 301 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 DLL3Q9NYJ7 618 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 TAS2R9Q9NYW1 312 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 VAPAQ9P0L0 249 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 VPS4AQ9UN37 437 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 ERVK-11Q9UQG0 969 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 PCDHB14Q9Y5E9 798 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 PCDHGA7Q9Y5G6 932 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 PCDHGA3Q9Y5H0 932 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 OR2W5A6NFC9 320 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 C9orf172C9J069 976 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 ONECUT2O95948 504 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 PORP16435 677 aaPredicted RBP16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 PTPN6P29350 595 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 MLC1Q15049 377 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 LCN10Q6JVE6 187 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 GOT1L1Q8NHS2 421 aaPredicted RBP16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 SUN3Q8TAQ9 357 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 MR1Q95460 341 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 HOPXQ9BPY8 73 aaPredicted RBP16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 DPH2Q9BQC3 489 aaPredicted RBP16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 NEUROD4Q9HD90 331 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 SLC25A37Q9NYZ2 338 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 SNX8Q9Y5X2 465 aa16.73■□□□□ 0.27
PTCHD3-202ENST00000622555 TEX51A0A1B0GUA7 166 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 TNFSF15O95150 251 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 MAOAP21397 527 aa16.72■□□□□ 0.27
PTCHD3-202ENST00000622555 PTGER1P34995 402 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms