RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 EXOGQ9Y2C4 368 aaKnown RBP4.14□□□□□ -1.75
CPNE3-213ENST00000622183 ZMYM6O95789 1325 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 MEI4A8MW99 385 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 PRR23D1E9PI22 279 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-213ENST00000622183 TRAFD1O14545 582 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-213ENST00000622183 GRID2O43424 1007 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 ANXA9O76027 345 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 FHP07954 510 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 ZSCAN5DPP0CG00 497 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 PRR23D2P0DMB1 279 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-213ENST00000622183 DESP17661 470 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 FUT1P19526 365 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 AOC1P19801 751 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 HSPA1LP34931 641 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 TKTL1P51854 596 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 TMEM50BP56557 158 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 SLC26A5P58743 744 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 MYBPC1Q00872 1141 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 SNX1Q13596 522 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 P2RY14Q15391 338 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 CEBPEQ15744 281 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 MLF2Q15773 248 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-213ENST00000622183 UPP1Q16831 310 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 AGKQ53H12 422 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 DNAJC21Q5F1R6 531 aaKnown RBP4.13□□□□□ -1.75
CPNE3-213ENST00000622183 TEX35Q5T0J7 233 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 DCAF12Q5T6F0 453 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 TRIM65Q6PJ69 517 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 UNC5DQ6UXZ4 953 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 ZFAND4Q86XD8 727 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 TBC1D10CQ8IV04 446 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 MINDY2Q8NBR6 621 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF248Q8NDW4 579 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 FAM71CQ8NEG0 241 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 RDH11Q8TC12 318 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 ATXN7L3BQ96GX2 97 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 COG3Q96JB2 828 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 C16orf45Q96MC5 204 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-213ENST00000622183 ALKBH3Q96Q83 286 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-213ENST00000622183 PLEKHA3Q9HB20 300 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 IL1RAPQ9NPH3 570 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 POLE3Q9NRF9 147 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 ENTPD4Q9Y227 616 aa4.13□□□□□ -1.75
CPNE3-213ENST00000622183 IGHV3-38A0A0C4DH36 116 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 ADAM12O43184 909 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 TSPAN2O60636 221 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 DUS4LO95620 317 aaKnown RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 IGKV3-20P01619 116 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 FCER2P06734 321 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 ZCCHC18P0CG32 403 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 MBL2P11226 248 aaPredicted RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 RALAP11233 206 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 MTIF2P46199 727 aaKnown RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 NDST1P52848 882 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 CRIP2P52943 208 aaPredicted RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 POLR2FP61218 127 aaKnown RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 GABPB1Q06547 395 aaPredicted RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 SPP2Q13103 211 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 NME3Q13232 169 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 KLF5Q13887 457 aaPredicted RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 SLC17A1Q14916 467 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 KNOP1Q1ED39 458 aaKnown RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF528Q3MIS6 628 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 MOGAT2Q3SYC2 334 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 DDI2Q5TDH0 399 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 TMEM26Q6ZUK4 368 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF329Q86UD4 541 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 OR52B6Q8NGF0 335 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 C11orf45Q8TAV5 145 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 SPPL2AQ8TCT8 520 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 PHYHIPQ92561 330 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 CAPNS2Q96L46 248 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 LGMNQ99538 433 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 NACA2Q9H009 215 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 PARLQ9H300 379 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 LIN28AQ9H9Z2 209 aaKnown RBP4.12□□□□□ -1.75
CPNE3-213ENST00000622183 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 LHX3Q9UBR4 397 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 AURKCQ9UQB9 309 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 ATP8B3O60423 1300 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 KIF7Q2M1P5 1343 aa4.12□□□□□ -1.75
CPNE3-213ENST00000622183 IGLV7-46A0A075B6I9 117 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 MEX3AA1L020 520 aaKnown RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 TMCO5BA8MYB1 307 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 SH2D1BO14796 132 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 TFECO14948 347 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 LINC01565O15544 149 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 HPDP32754 393 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 MAGEA4P43358 317 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 NPY2RP49146 381 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 FUT7Q11130 342 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 FASTKD3Q14CZ7 662 aaKnown RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 CLPPQ16740 277 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 CWC27Q6UX04 472 aaKnown RBP4.11□□□□□ -1.75
CPNE3-213ENST00000622183 ASRGL1Q7L266 308 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 GPR142Q7Z601 462 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 CARM1Q86X55 608 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 METTL4Q8N3J2 472 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 ZBTB44Q8NCP5 570 aa4.11□□□□□ -1.75
CPNE3-213ENST00000622183 CCDC110Q8TBZ0 833 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms