RNA–Protein interactions for RNA: ENST00000620941.1

SRSF3-208, Transcript of serine and arginine rich splicing factor 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SRSF3, Length 869 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-208ENST00000620941 MAPRE3Q9UPY8 281 aa12.23□□□□□ -0.45
SRSF3-208ENST00000620941 LAMP3Q9UQV4 416 aa12.23□□□□□ -0.45
SRSF3-208ENST00000620941 C15orf41Q9Y2V0 281 aa12.23□□□□□ -0.45
SRSF3-208ENST00000620941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.22□□□□□ -0.452e-8■■■□□ 17.8
SRSF3-208ENST00000620941 CYR61O00622 381 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 H2AFYO75367 372 aaKnown RBP12.22□□□□□ -0.45
SRSF3-208ENST00000620941 MBD3O95983 291 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 CRHP06850 196 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 SOX18P35713 384 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 NAGLUP54802 743 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 REEP5Q00765 189 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 SPA17Q15506 151 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 ZNF470Q6ECI4 717 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 BHLHB9Q6PI77 547 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 ZNF704Q6ZNC4 412 aaPredicted RBP12.22□□□□□ -0.45
SRSF3-208ENST00000620941 GRAMD2AQ8IUY3 354 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 CNEP1R1Q8N9A8 125 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 OR56A3Q8NH54 315 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 CD200R1Q8TD46 325 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 EEF1AKMT1Q8WVE0 214 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 ROBO4Q8WZ75 1007 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 ALG3Q92685 438 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 RBM18Q96H35 190 aaKnown RBP12.22□□□□□ -0.45
SRSF3-208ENST00000620941 RILPQ96NA2 401 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 UCN2Q96RP3 112 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 GAL3ST4Q96RP7 486 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 SERINC2Q96SA4 455 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 SPNS1Q9H2V7 528 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 UBQLN3Q9H347 655 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 PELI2Q9HAT8 420 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 TMEM160Q9NX00 188 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 TRMT6Q9UJA5 497 aaKnown RBP12.22□□□□□ -0.45
SRSF3-208ENST00000620941 SPACA6W5XKT8 324 aa12.22□□□□□ -0.45
SRSF3-208ENST00000620941 IQANK1A0A1B0GTG1 560 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 A0A1W2PNV4 684 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 HS3ST1O14792 307 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 CDH16O75309 829 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 ETHE1O95571 254 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 MGAT1P26572 445 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 PLA2G16P53816 162 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 LIM2P55344 173 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 AP1S2P56377 157 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.45
SRSF3-208ENST00000620941 NTRK2Q16620 822 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 DCST1Q5T197 706 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 C6orf52Q5T4I8 152 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 OR2A2Q6IF42 318 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 TRIM40Q6P9F5 258 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 LYPD8Q6UX82 237 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 CLEC17AQ6ZS10 378 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 ZNF550Q7Z398 422 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 P4HA3Q7Z4N8 544 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 LUZP1Q86V48 1076 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 UBL4BQ8N7F7 174 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 CAVIN3Q969G5 261 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 ANKRD9Q96BM1 317 aaPredicted RBP12.21□□□□□ -0.45
SRSF3-208ENST00000620941 REPS1Q96D71 796 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 PGM2Q96G03 612 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 TSNARE1Q96NA8 513 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 DGAT2Q96PD7 388 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 OR4K3Q96R72 315 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 PLA2G12AQ9BZM1 189 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 EIF2B3Q9NR50 452 aaKnown RBP12.21□□□□□ -0.45
SRSF3-208ENST00000620941 FETUBQ9UGM5 382 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 DAPP1Q9UN19 280 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 SOX13Q9UN79 622 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 KCNE2Q9Y6J6 123 aa12.21□□□□□ -0.45
SRSF3-208ENST00000620941 DOCK7Q96N67 2140 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 ROS1P08922 2347 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 LRIT2A6NDA9 550 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 C4orf51C9J302 202 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 LDB3O75112 727 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 TNFSF13O75888 250 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 TGM3Q08188 693 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 BIKQ13323 160 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 KLF1Q13351 362 aaPredicted RBP12.2□□□□□ -0.46
SRSF3-208ENST00000620941 KBTBD12Q3ZCT8 623 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 CHMP1BQ7LBR1 199 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 TMPRSS11BQ86T26 416 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 YRDCQ86U90 279 aaKnown RBP12.2□□□□□ -0.46
SRSF3-208ENST00000620941 C9orf40Q8IXQ3 194 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 FAM83FQ8NEG4 500 aaPredicted RBP12.2□□□□□ -0.46
SRSF3-208ENST00000620941 OR2L5Q8NG80 312 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 OR1J4Q8NGS1 313 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 MS4A6EQ96DS6 147 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 MARK4Q96L34 752 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 CSF3RQ99062 836 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 FRMD8P1Q9BZ68 369 aaPredicted RBP12.2□□□□□ -0.46
SRSF3-208ENST00000620941 REXO4Q9GZR2 422 aaKnown RBP12.2□□□□□ -0.46
SRSF3-208ENST00000620941 FBXO6Q9NRD1 293 aaPredicted RBP12.2□□□□□ -0.46
SRSF3-208ENST00000620941 SYBUQ9NX95 663 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 PTBP2Q9UKA9 531 aaKnown RBP12.2□□□□□ -0.46
SRSF3-208ENST00000620941 MED16Q9Y2X0 877 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 WIF1Q9Y5W5 379 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 NINQ8N4C6 2090 aa12.2□□□□□ -0.46
SRSF3-208ENST00000620941 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.19□□□□□ -0.46
SRSF3-208ENST00000620941 CTAGE15A4D2H0 777 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms