RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 HORMAD2Q8N7B1 307 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 ENKURQ8TC29 256 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 ZFAND1Q8TCF1 268 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 SLC38A5Q8WUX1 472 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 MTERF3Q96E29 417 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 WDR34Q96EX3 536 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 FUZQ9BT04 418 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 GON7Q9BXV9 100 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 SLC6A16Q9GZN6 736 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 TAAR2Q9P1P5 351 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 LSM7Q9UK45 103 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 NDRG2Q9UN36 371 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 TMA7Q9Y2S6 64 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 DENND4CQ5VZ89 1909 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 SMIM30A4D0T7 59 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 OR6C70A6NIJ9 312 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 AGRPO00253 132 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 ZNF197O14709 1029 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 POP4O95707 220 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 RAB36O95755 333 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 H1F0P07305 194 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 IL3P08700 152 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 DGKGP49619 791 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 CCL23P55773 120 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 GPLD1P80108 840 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 CYP4F8P98187 520 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 ATAT1Q5SQI0 421 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 MPP7Q5T2T1 576 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 KIAA1841Q6NSI8 718 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 FAM180BQ6P0A1 224 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 PAMR1Q6UXH9 720 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 Q6ZVL8 140 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 RBM45Q8IUH3 476 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 CPXM2Q8N436 756 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 RASGEF1AQ8N9B8 481 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 LMNTD1Q8N9Z9 388 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 NLGN4YQ8NFZ3 816 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 ZNF480Q8WV37 535 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 MED18Q9BUE0 208 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 TVP23BQ9NYZ1 205 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 TESQ9UGI8 421 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 PIPSLA2A3N6 862 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 NPPBP16860 134 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 CPN2P22792 545 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 PDHA2P29803 388 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 ETV3P41162 512 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 ATN1P54259 1190 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 FAPQ12884 760 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 LYPD8Q6UX82 237 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 FAM26EQ8N5C1 309 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 YIPF7Q8N8F6 280 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 OR4D11Q8NGI4 311 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 TMEM169Q96HH4 297 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 WFDC6Q9BQY6 131 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 KATNB1Q9BVA0 655 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 NLNQ9BYT8 704 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 PRRG3Q9BZD7 231 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 SPNS1Q9H2V7 528 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 RERGLQ9H628 205 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 IL21Q9HBE4 155 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 SPIN1Q9Y657 262 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 NUP210Q8TEM1 1887 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 HTTP42858 3142 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 TLX2O43763 284 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 ERP29P30040 261 aaKnown RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 DCDC1P59894 354 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 RPS25P62851 125 aaKnown RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 GPR19Q15760 415 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 SYT14P1Q58G82 188 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 LCN1P1Q5VSP4 162 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 TPGS2Q68CL5 300 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 TNFAIP8L2Q6P589 184 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 DEF8Q6ZN54 512 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 RNF180Q86T96 592 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 PEX5LQ8IYB4 626 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 SYT14Q8NB59 555 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 ATP6V1C2Q8NEY4 427 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 TMEM19Q96HH6 336 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 KCTD7Q96MP8 289 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 RIOK2Q9BVS4 552 aaKnown RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 IRF2BPLQ9H1B7 796 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 A4GALTQ9NPC4 353 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 CFAP97Q9P2B7 532 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 KLHL21Q9UJP4 597 aa18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 SF3B6Q9Y3B4 125 aaKnown RBP18.59■□□□□ 0.57
PDLIM3-212ENST00000620787 C5orf58C9J3I9 102 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 LRRTM2O43300 516 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 CPNE3O75131 537 aaKnown RBP18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 HLA-DQB1P01920 261 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 C1GALT1C1LP0DN25 315 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 ELNP15502 786 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 TNNI3P19429 210 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 MEF2AQ02078 507 aaPredicted RBP18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 C19orf57Q0VDD7 668 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 EFCAB11Q9BUY7 163 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 POLDIP3Q9BY77 421 aaKnown RBP18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 ANKRA2Q9H9E1 313 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 CARD8Q9Y2G2 431 aa18.58■□□□□ 0.56
PDLIM3-212ENST00000620787 A0A0X1KG70 313 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms