RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 STARP49675 285 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 ZNF140P52738 457 aaPredicted RBP6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 BSPH1Q075Z2 132 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 TOMM20Q15388 145 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 TAF1AQ15573 450 aaPredicted RBP6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 TPSAB1Q15661 275 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 SWI5Q1ZZU3 235 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 IQCCQ4KMZ1 466 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 BOLA3Q53S33 107 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 HP1BP3Q5SSJ5 553 aaPredicted RBP6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 ICE2Q659A1 982 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 ENPP6Q6UWR7 440 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 HSDL2Q6YN16 418 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 ZNF619Q8N2I2 560 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 PPFIBP2Q8ND30 876 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 SMARCE1Q969G3 411 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 HRASLS5Q96KN8 279 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 APOL2Q9BQE5 337 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 DOHHQ9BU89 302 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 ACTR6Q9GZN1 396 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 GANQ9H2C0 597 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 RHBGQ9H310 441 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 PARVAQ9NVD7 372 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 FAM153AQ9UHL3 310 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 IKZF3Q9UKT9 509 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 CNOT11Q9UKZ1 510 aaKnown RBP6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 TTC7AQ9ULT0 858 aaPredicted RBP6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 CLDN16Q9Y5I7 305 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 U3KQE9 123 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
SCAMP1-206ENST00000618166 CSMD3Q7Z407 3707 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 OR51F1A6NGY5 319 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 SHISA9B4DS77 424 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 H7BY64 318 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 PLOD2O00469 737 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 GPC4O75487 556 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 ESR1P03372 595 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 RPN2P04844 631 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 CPN1P15169 458 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 MDKP21741 143 aaPredicted RBP6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 IL10P22301 178 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 RPA3P35244 121 aaPredicted RBP6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 GJC1P36383 396 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 COILP38432 576 aaPredicted RBP6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 EIF3BP55884 814 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 JAM2P57087 298 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 ASPHQ12797 758 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 FAM189A2Q15884 450 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 CARTPTQ16568 116 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 DEFB134Q4QY38 66 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 OPN5Q6U736 354 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 NPNTQ6UXI9 565 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 SCUBE1Q8IWY4 988 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 GALNT12Q8IXK2 581 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 RCOR2Q8IZ40 523 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 FAM13CQ8NE31 585 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 FAM83FQ8NEG4 500 aaPredicted RBP6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 ASB11Q8WXH4 323 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 RAD51AP1Q96B01 352 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 CTHRC1Q96CG8 243 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 DNAJC1Q96KC8 554 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 ZNF597Q96LX8 424 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 WWC2-AS2Q96NR7 200 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 PRAP1Q96NZ9 151 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 PIMREGQ9BSJ6 248 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 BPESC1Q9GZL8 116 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 SLITRK2Q9H156 845 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 CDC42EP4Q9H3Q1 356 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 USP22Q9UPT9 525 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 C15orf41Q9Y2V0 281 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 HEY1Q9Y5J3 304 aa6.11□□□□□ -1.43
SCAMP1-206ENST00000618166 DPRXA6NFQ7 191 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 GALR3O60755 368 aaPredicted RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 SMC2O95347 1197 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 NEFLP07196 543 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 PPP3CBP16298 524 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 GCH1P30793 250 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 MTIF2P46199 727 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 HNRNPFP52597 415 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 CDH11P55287 796 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 EEF1A1P68104 462 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 RNF4P78317 190 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 IRF9Q00978 393 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 MEF2AQ02078 507 aaPredicted RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 PRDX1Q06830 199 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 BMPR2Q13873 1038 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 DOC2AQ14183 400 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 TERF2Q15554 542 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 TSC22D1Q15714 1073 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 CTU2Q2VPK5 515 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 GPR33Q49SQ1 333 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 EEF1A1P5Q5VTE0 462 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 KRT222Q8N1A0 295 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 LINC01356Q8N9X3 169 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 ZNF740Q8NDX6 193 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 TMEM52Q8NDY8 209 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 KCTD4Q8WVF5 259 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 FIG4Q92562 907 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 ZBTB8AQ96BR9 441 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms