RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SCAPQ12770 1279 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 ALG10Q5BKT4 473 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 ZNF648Q5T619 568 aaPredicted RBP10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 TMPRSS12Q86WS5 348 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 NECAB3Q96P71 396 aaPredicted RBP10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 OR10A4Q9H209 315 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 ACSL6Q9UKU0 697 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 LIPT1Q9Y234 373 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 UPK3BL1B0FP48 263 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 UPK3BL2E5RIL1 263 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 LDB2O43679 373 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 MAFKO60675 156 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 HCKP08631 526 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 FRKP42685 505 aaPredicted RBP10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 SLC6A9P48067 706 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 FKBP1BP68106 108 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 SP3Q02447 781 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 LRP8Q14114 963 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 NETO1Q8TDF5 533 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 TESCQ96BS2 214 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 RAD9AQ99638 391 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 CCDC86Q9H6F5 360 aaKnown RBP10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 ZDHHC4Q9NPG8 344 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 IL36AQ9UHA7 158 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 ENPP4Q9Y6X5 453 aa10.22□□□□□ -0.77
CLTCL1-209ENST00000617103 KNDC1Q76NI1 1749 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 TRBV2A0A0J9YWF9 115 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 SCDO00767 359 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 SCAMP1O15126 338 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 C1GALT1C1LP0DN25 315 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 RAB3BP20337 219 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 CRHBPP24387 322 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 ACTR1BP42025 376 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 CDKN2CP42773 168 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 ACTR1AP61163 376 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 EMX1Q04741 257 aaPredicted RBP10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 POU4F2Q12837 409 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 PGM2L1Q6PCE3 622 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 SUSD1Q6UWL2 747 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 Q6ZVU0 165 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 CNOT9Q92600 299 aaKnown RBP10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 KCNIP3Q9Y2W7 256 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 UCHL1P09936 223 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 OSMP13725 252 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 NDUFV2P19404 249 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 DRD5P21918 477 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 PREPP48147 710 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 ARSDP51689 593 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 INHBCP55103 352 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 SF3A2Q15428 464 aaKnown RBP10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 SPIN3Q5JUX0 258 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 ELP2Q6IA86 826 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 ARSKQ6UWY0 536 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 FAM86B1Q8N7N1 296 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 OR6N2Q8NGY6 317 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 SH3RF2Q8TEC5 729 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 RELTQ969Z4 430 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 ELMOD3Q96FG2 381 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 ATG5Q9H1Y0 275 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 OR51E2Q9H255 320 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 SERINC1Q9NRX5 453 aa10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 AFDNP55196 1824 aaKnown RBP10.21□□□□□ -0.77
CLTCL1-209ENST00000617103 UNC119BA6NIH7 251 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 HSPA12AO43301 675 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 MPC1LP0DKB6 136 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 S1PR1P21453 382 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 GPX3P22352 226 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 ACTA2P62736 377 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 ACTG2P63267 376 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 GK3PQ14409 553 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 C11orf91Q3C1V1 193 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 CNIH2Q6PI25 160 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 SPATC1Q76KD6 591 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 SSX6Q7RTT6 188 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 GALNT10Q86SR1 603 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF565Q8N9K5 539 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 SYT14Q8NB59 555 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 GSTO2Q9H4Y5 243 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 PCDHB16Q9NRJ7 776 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 C3P01024 1663 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 A0A0G2JMP0 313 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 SOCS5O75159 536 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 IFNA2P01563 188 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 C8AP07357 584 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 SFTPBP07988 381 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 EVI2BP34910 448 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 HTR6P50406 440 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 ERVK-21P61565 698 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 AADACL4Q5VUY2 407 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 PLAG1Q6DJT9 500 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 KCTD18Q6PI47 426 aaPredicted RBP10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 CHRDL2Q6WN34 429 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 PRSS58Q8IYP2 241 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 GTPBP8Q8N3Z3 284 aaPredicted RBP10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 OR4M2Q8NGB6 313 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 OR51A7Q8NH64 312 aa10.21□□□□□ -0.78
CLTCL1-209ENST00000617103 FUBP1Q96AE4 644 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms