RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 MED26O95402 600 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 GBAP04062 536 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 STSP08842 583 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 ANXA4P09525 319 aaPredicted RBP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 PRF1P14222 555 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 LBPP18428 481 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 PRPH2P23942 346 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 CERS1P27544 350 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 EPHA3P29320 983 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 BSGP35613 385 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 MAPK12P53778 367 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 SEC24CP53992 1094 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 OLR1P78380 273 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 Q0VFX4 171 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 SF3A3Q12874 501 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 MFAP5Q13361 173 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 Q6ZSR9 355 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 PDSS2Q86YH6 399 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 ARHGEF39Q8N4T4 335 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 OR11G2Q8NGC1 345 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 RFWD2Q8NHY2 731 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 CDC26Q8NHZ8 85 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 THOC3Q96J01 351 aaKnown RBP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 NPLQ9BXD5 320 aaPredicted RBP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 EBPLQ9BY08 206 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 WDR55Q9H6Y2 383 aaPredicted RBP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 DDX31Q9H8H2 851 aaKnown RBP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 CLK4Q9HAZ1 481 aaKnown RBP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 TRPC4Q9UBN4 977 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 GIMAP2Q9UG22 337 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 PHF11Q9UIL8 331 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 FBXW2Q9UKT8 454 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 TMED5Q9Y3A6 229 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 CCL27Q9Y4X3 112 aa13.94□□□□□ -0.18
UBXN1-218ENST00000616865 DIDO1Q9BTC0 2240 aaKnown RBP13.94□□□□□ -0.18
UBXN1-218ENST00000616865 ZGRF1Q86YA3 2104 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 A0A1B0GUH1 482 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 VSTM2BA6NLU5 285 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 CHST10O43529 356 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 EEDO75530 441 aaKnown RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 FAM58BPP0C7Q3 252 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 RNH1P13489 461 aaKnown RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 ALOX15P16050 662 aaPredicted RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 ELAVL4P26378 380 aaKnown RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 TLX1P31314 330 aaPredicted RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 TIA1P31483 386 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 IDH3AP50213 366 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 OCA2Q04671 838 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 DSG2Q14126 1118 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 SLC9B1Q4ZJI4 515 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 C6orf136Q5SQH8 315 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 MFSD4BQ5TF39 518 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 NOXRED1Q6NXP6 359 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 RPUSD3Q6P087 351 aaKnown RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 EPGNQ6UW88 154 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 ISLR2Q6UXK2 745 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 ZNF793Q6ZN11 406 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 LINC00696Q6ZRV3 163 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 SPATA19Q7Z5L4 167 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 FJX1Q86VR8 437 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 ZCCHC7Q8N3Z6 543 aaKnown RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 DTWD1Q8N5C7 304 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 CEP70Q8NHQ1 597 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 C1orf50Q9BV19 199 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 WDR41Q9HAD4 459 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 TCF7L2Q9NQB0 619 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 OLAHQ9NV23 265 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 MCM8Q9UJA3 840 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 POLR3HQ9Y535 204 aaPredicted RBP13.93□□□□□ -0.18
UBXN1-218ENST00000616865 CSMD2Q7Z408 3487 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 CPAMD8Q8IZJ3 1885 aa13.93□□□□□ -0.18
UBXN1-218ENST00000616865 SCN3AQ9NY46 2000 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 PRSS44E7EML9 344 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 NPIPB8E9PQR5 432 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 HPP00738 406 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 CPN2P22792 545 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 BUD31P41223 144 aaPredicted RBP13.92□□□□□ -0.18
UBXN1-218ENST00000616865 TDGF1P3P51864 188 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 ARFIP2P53365 341 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 ERVK-8P63133 956 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 MAT1AQ00266 395 aaKnown RBP13.92□□□□□ -0.18
UBXN1-218ENST00000616865 EMX2Q04743 252 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 RPS6KA2Q15349 733 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 SMU1Q2TAY7 513 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 RFTN2Q52LD8 501 aaPredicted RBP13.92□□□□□ -0.18
UBXN1-218ENST00000616865 MAVSQ7Z434 540 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 GPR180Q86V85 440 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 CA13Q8N1Q1 262 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 BCORP1Q8N888 145 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 OR5T3Q8NGG3 340 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 OR51Q1Q8NH59 317 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 ACTRT2Q8TDY3 377 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 ADAMTS18Q8TE60 1221 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 PEX11GQ96HA9 241 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 ELAC2Q9BQ52 826 aaKnown RBP13.92□□□□□ -0.18
UBXN1-218ENST00000616865 MESP1Q9BRJ9 268 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 CRB3Q9BUF7 120 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 CCDC28BQ9BUN5 200 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 FAIM2Q9BWQ8 316 aa13.92□□□□□ -0.18
UBXN1-218ENST00000616865 TMEM120AQ9BXJ8 343 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms