RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 AVPR1BP47901 424 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 NFYCQ13952 458 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 IL11RAQ14626 422 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 IGFBP7Q16270 282 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 MAPKAPK3Q16644 382 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 PGS1Q32NB8 556 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 PAGE3Q5JUK9 113 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 LRIF1Q5T3J3 769 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 OR4F3Q6IEY1 312 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 OR52E8Q6IFG1 317 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 ANKRD26P1Q6NSI1 321 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 SLC48A1Q6P1K1 146 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 PRMT9Q6P2P2 845 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 SLC2A7Q6PXP3 512 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 MED25Q71SY5 747 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 ARPINQ7Z6K5 226 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 DHDDSQ86SQ9 333 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 PTRH1Q86Y79 214 aaKnown RBP10.77□□□□□ -0.69
SLIRP-212ENST00000613856 DSELQ8IZU8 1212 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 MMP21Q8N119 569 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 BMPERQ8N8U9 685 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 VPS37AQ8NEZ2 397 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 OR9A4Q8NGU2 314 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 NUDT8Q8WV74 236 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 ITCHQ96J02 903 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 CCDC115Q96NT0 180 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 GPATCH1Q9BRR8 931 aaKnown RBP10.77□□□□□ -0.69
SLIRP-212ENST00000613856 NDC1Q9BTX1 674 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 WDR41Q9HAD4 459 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 SERHLQ9NQF3 203 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 FBXW2Q9UKT8 454 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 CES1P1Q9UKY3 287 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 RARRES3Q9UL19 164 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 CDC14AQ9UNH5 594 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 NBASA2RRP1 2371 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 A0A096LPI6 279 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 TRBV5-3A0A0A0MS03 114 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 PRSS51A0A1B0GVH4 220 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 A0A1B0GX78 115 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 CFAP73A6NFT4 308 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF860A6NHJ4 632 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 B4E171 279 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 SGK494L7N484 410 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 PDPK1O15530 556 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF749O43361 778 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 ERN1O75460 977 aaKnown RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 KCNH1O95259 989 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 HBQ1P09105 142 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 RNH1P13489 461 aaKnown RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 CPN2P22792 545 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 TLX1P31314 330 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 TSPAN7P41732 249 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 TRPC1P48995 793 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 ALDH9A1P49189 494 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 SLC25A3Q00325 362 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 MC2RQ01718 297 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 CEBPEQ15744 281 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 TBR1Q16650 682 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 MPEG1Q2M385 716 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 C18orf63Q68DL7 685 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 RHBDD2Q6NTF9 364 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 DLEU7Q6UYE1 221 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 PPP1R3BQ86XI6 285 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 SAMD14Q8IZD0 417 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 GOT1L1Q8NHS2 421 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 LRRC58Q96CX6 371 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 LIN37Q96GY3 246 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 OR6C1Q96RD1 312 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 CSF3RQ99062 836 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 HOPXQ9BPY8 73 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 STRADBQ9C0K7 418 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 MMADHCQ9H3L0 296 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 FBXO8Q9NRD0 319 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 ACSS1Q9NUB1 689 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 AKAP7Q9P0M2 348 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 SH3BP4Q9P0V3 963 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 CROTQ9UKG9 612 aa10.76□□□□□ -0.69
SLIRP-212ENST00000613856 PRPF19Q9UMS4 504 aaKnown RBP10.76□□□□□ -0.69
SLIRP-212ENST00000613856 SCN2AQ99250 2005 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 SDK2Q58EX2 2172 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 EFCAB7A8K855 629 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 CYR61O00622 381 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 CHST10O43529 356 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 ZCCHC18P0CG32 403 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 ITIH1P19827 911 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 PTPN6P29350 595 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 PSME3P61289 254 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 OLR1P78380 273 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 DSG2Q14126 1118 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 MLC1Q15049 377 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 PRSS53Q2L4Q9 553 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 C6orf10Q5SRN2 563 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 TTLL10Q6ZVT0 673 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 DEFB107AQ8IZN7 70 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 ARHGAP24Q8N264 748 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 KIF2BQ8N4N8 673 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 OR5T3Q8NGG3 340 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms