RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	ST13P4	Q8IZP2	240 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	LRRC25	Q8N386	305 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	MYRIP	Q8NFW9	859 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR5M3	Q8NGP4	307 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLC22A8	Q8TCC7	542 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SARAF	Q96BY9	339 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SPACA9	Q96E40	222 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	DGAT2	Q96PD7	388 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	PELO	Q9BRX2	385 aa	Known RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	CENPK	Q9BS16	269 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF717	Q9BY31	904 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	DPH5	Q9H2P9	285 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR51B5	Q9H339	312 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	DDX31	Q9H8H2	851 aa	Known RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	ACKR4	Q9NPB9	350 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	DMRT3	Q9NQL9	472 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	QPCTL	Q9NXS2	382 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	TUBA8	Q9NY65	449 aa	Predicted RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	CNIH4	Q9P003	139 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	PCDHGA11	Q9Y5H2	935 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	LIPG	Q9Y5X9	500 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	DNAJC13	O75165	2243 aa		10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.27	□□□□□ -0.77
CBWD1-222	ENST00000613508	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508		A0A0G2JNJ9	132 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ANKRD33B	A6NCL7	494 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR6C76	A6NM76	312 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	FAM90A27P	A6NNH2	459 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	SUPT3H	B4E1H0	165 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	HRK	O00198	91 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	SUPT3H	O75486	399 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	GPR75	O95800	540 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	CELA3A	P09093	270 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	PCNA	P12004	261 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	GABRA1	P14867	456 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ALOX15	P16050	662 aa	Predicted RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	STX2	P32856	288 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	GMPR	P36959	345 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	MAGEA4	P43358	317 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZFP36L2	P47974	494 aa	Known RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	DNASE1L1	P49184	302 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	MAN2A2	P49641	1150 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	MRPS25	P82663	173 aa	Known RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	GUCY2D	Q02846	1103 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	FOLH1	Q04609	750 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	CUL3	Q13618	768 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	SETDB1	Q15047	1291 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLC25A35	Q3KQZ1	300 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	MRM1	Q6IN84	353 aa	Known RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	DGAT2L6	Q6ZPD8	337 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	RAPH1	Q70E73	1250 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	CMC1	Q7Z7K0	106 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	CENPL	Q8N0S6	344 aa	Predicted RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	CLYBL	Q8N0X4	340 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	FBXW8	Q8N3Y1	598 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	PPM1N	Q8N819	430 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR5M9	Q8NGP3	310 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	EXT2	Q93063	718 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	PROK2	Q9HC23	129 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZFP64	Q9NPA5	681 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508		Q9UFV3	132 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ITGB1BP2	Q9UKP3	347 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ACOT9	Q9Y305	439 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	ASB4	Q9Y574	426 aa		10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508	INTS1	Q8N201	2190 aa	Known RBP	10.26	□□□□□ -0.77
CBWD1-222	ENST00000613508		A0A087X1B8	175 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508		A0A0A6YYD5	115 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	TRGV5	A0A0B4J1U4	118 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ATP6AP2	A0A1C7CYW4	349 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	LRRC3C	A6NJW4	275 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	FOXE1	O00358	373 aa	Predicted RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	SAP18	O00422	153 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ATP6AP2	O75787	350 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	FAM155B	O75949	473 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	CD1E	P15812	388 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ENDOU	P21128	410 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	SERPINB3	P29508	390 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	BSG	P35613	385 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	PIGA	P37287	484 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ADH7	P40394	386 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	BUD31	P41223	144 aa	Predicted RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	PIK3CG	P48736	1102 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	RAP1GDS1	P52306	607 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ALDH18A1	P54886	795 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	PLTP	P55058	493 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	HNRNPH2	P55795	449 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLC37A1	P57057	533 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLMAP	Q14BN4	828 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ACAP2	Q15057	778 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	PCBP2	Q15366	365 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	NTRK2	Q16620	822 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	FAM83E	Q2M2I3	478 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	C1orf185	Q5T7R7	199 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	WLS	Q5T9L3	541 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	RIPPLY2	Q5TAB7	128 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	CES4A	Q5XG92	561 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms