RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	C2orf80	Q0P641	193 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	UBE2U	Q5VVX9	321 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	KIAA1614	Q5VZ46	1190 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	FAM71E1	Q6IPT2	247 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	MAMSTR	Q6ZN01	415 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	TMEM145	Q8NBT3	493 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	PPCDC	Q96CD2	204 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	LGALS12	Q96DT0	336 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	TXNDC15	Q96J42	360 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	PITX2	Q99697	317 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	CTRC	Q99895	268 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	SPNS1	Q9H2V7	528 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	IMP3	Q9NV31	184 aa	Known RBP	13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	PCM1	Q15154	2024 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	OR2A25	A4D2G3	310 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SAP18	O00422	153 aa	Known RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	TNFRSF21	O75509	655 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	GBA	P04062	536 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SELENOW	P63302	87 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	MEF2A	Q02078	507 aa	Predicted RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	KRR1	Q13601	381 aa	Known RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	DNASE1L3	Q13609	305 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	COX20	Q5RI15	118 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	GCNT6	Q5T4J0	391 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	TMEM236	Q5W0B7	351 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	ANGPTL8	Q6UXH0	198 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	ZNF540	Q8NDQ6	660 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	OR52N2	Q8NGI0	321 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	MCFD2	Q8NI22	146 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	OR1E3	Q8WZA6	343 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SLC38A4	Q969I6	547 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	TSACC	Q96A04	125 aa	Predicted RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	MTERF3	Q96E29	417 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	ZHX1-C8orf76	Q96EF9	292 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	PDXP	Q96GD0	296 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SLC35A5	Q9BS91	424 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	RUBCNL	Q9H714	662 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	GPATCH2	Q9NW75	528 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	RAPGEFL1	Q9UHV5	662 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	ZNF229	Q9UJW7	825 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	PCDHGB3	Q9Y5G1	929 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	KLHL18	O94889	574 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	RASGRP1	O95267	797 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	ETFA	P13804	333 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	GSS	P48637	474 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	PXN	P49023	591 aa	Predicted RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	PCYT1A	P49585	367 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SRP54	P61011	504 aa	Known RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	MC1R	Q01726	317 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	RBBP4	Q09028	425 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	ARHGAP19	Q14CB8	494 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	KCNJ8	Q15842	424 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	PROX2	Q3B8N5	592 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	UAP1L1	Q3KQV9	507 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	LCTL	Q6UWM7	567 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	CCDC81	Q6ZN84	652 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	PAGE2	Q7Z2X7	111 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	FAM160A2	Q8N612	972 aa	Predicted RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	FAM174A	Q8TBP5	190 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	CLDN23	Q96B33	292 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SPACA7	Q96KW9	195 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SIGLEC11	Q96RL6	698 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SLX1A	Q9BQ83	275 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	MOV10	Q9HCE1	1003 aa	Known RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	SPAST	Q9UBP0	616 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	HEBP2	Q9Y5Z4	205 aa		13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	MN1	Q10571	1320 aa	Predicted RBP	13.19	□□□□□ -0.3
COPS7B-223	ENST00000611614	EFCAB9	A8MZ26	197 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614		E9PQ18	207 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	SCAMP1	O15126	338 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	PEX14	O75381	377 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	CXCL12	P48061	93 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	TAS2R50	P59544	299 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	NCS1	P62166	190 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	ELOA	Q14241	798 aa	Known RBP	13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	PRAMEF14	Q5SWL7	426 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	PRAMEF13	Q5VWM6	474 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	LAIR1	Q6GTX8	287 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	ABI3BP	Q7Z7G0	1075 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	CHAC2	Q8WUX2	184 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	ITPA	Q9BY32	194 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	AASS	Q9UDR5	926 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	PLEKHM1	Q9Y4G2	1056 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	COLEC10	Q9Y6Z7	277 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614		A0A1W2PPC4	97 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	MAN1A2	O60476	641 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	FADS2	O95864	444 aa	Known RBP	13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	KLK1	P06870	262 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	CD36	P16671	472 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	PTX3	P26022	381 aa	Predicted RBP	13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	ALDH4A1	P30038	563 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	RRM2	P31350	389 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	TGFBR2	P37173	567 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	LSM3	P62310	102 aa	Known RBP	13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	NPRL3	Q12980	569 aa		13.18	□□□□□ -0.3
COPS7B-223	ENST00000611614	SELENBP1	Q13228	472 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms