RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 GPRC5BQ9NZH0 403 aa15.93■□□□□ 0.14
CHMP4A-211ENST00000609024 NCF1BA6NI72 391 aaPredicted RBP15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 LRRC3CA6NJW4 275 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 NCF1CA8MVU1 366 aaPredicted RBP15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 H7C1Q1 480 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 LRATO95237 230 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 C1QAP02745 245 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 NCF1P14598 390 aaPredicted RBP15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 ZNF37AP17032 561 aaPredicted RBP15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 STT3AP46977 705 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 CRYZQ08257 329 aaKnown RBP15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 LAPTM5Q13571 262 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 PPP1R7Q15435 360 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 PAGE2BQ5JRK9 111 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 TTC27Q6P3X3 843 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 SYDE1Q6ZW31 735 aaPredicted RBP15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 PACS2Q86VP3 889 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 C9orf40Q8IXQ3 194 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 TRIM58Q8NG06 486 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 SPATA3Q8NHX4 192 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 GRK7Q8WTQ7 553 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 ZNF592Q92610 1267 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 ISL2Q96A47 359 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 MAPKAP1Q9BPZ7 522 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 TBCDQ9BTW9 1192 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 PHACTR1Q9C0D0 580 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 SH2D2AQ9NP31 389 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 PRDM7Q9NQW5 492 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 WWOXQ9NZC7 414 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 NDRG3Q9UGV2 375 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 IKZF3Q9UKT9 509 aa15.92■□□□□ 0.14
CHMP4A-211ENST00000609024 SH3D21A4FU49 640 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 CD8B2A6NJW9 211 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 HRGP04196 525 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 FBXO45P0C2W1 286 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 TMIGD3P0DMS9 266 aaPredicted RBP15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 RPP38P78345 283 aaKnown RBP15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 TEDDM1Q5T9Z0 273 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 RNF111Q6ZNA4 994 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 CAPN12Q6ZSI9 719 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 OR4N5Q8IXE1 308 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 TCAIMQ8N3R3 496 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 ACOT4Q8N9L9 421 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 SPC24Q8NBT2 197 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 SMPDL3BQ92485 455 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 PPWD1Q96BP3 646 aaKnown RBP15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 PTCD3Q96EY7 689 aaKnown RBP15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 VPS39Q96JC1 886 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 NAP1L3Q99457 506 aaPredicted RBP15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 EFCAB11Q9BUY7 163 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 PRDM14Q9GZV8 571 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 DNAJC11Q9NVH1 559 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 SLC17A6Q9P2U8 582 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 SLC6A5Q9Y345 797 aa15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 CHCHD2Q9Y6H1 151 aaPredicted RBP15.91■□□□□ 0.14
CHMP4A-211ENST00000609024 OR10H2O60403 315 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 SNX4O95219 450 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 ACSL3O95573 720 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 IL18BPO95998 194 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 TLX1P31314 330 aaPredicted RBP15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 SSR2P43308 183 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 SLC6A12P48065 614 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 C18orf21Q32NC0 220 aaPredicted RBP15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 HLA-DQA1Q5Y7H0 255 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 POMZP3Q6PJE2 187 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 ADGRD1Q6QNK2 874 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 CXXC5Q7LFL8 322 aaKnown RBP15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 LUZP2Q86TE4 346 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 LRRC75A-AS1Q8N1F1 130 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 ANKRD9Q96BM1 317 aaPredicted RBP15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 RHBDF1Q96CC6 855 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 CFAP36Q96G28 342 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 FBXL20Q96IG2 436 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 COX4I2Q96KJ9 171 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 Q96MF0 132 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 PELOQ9BRX2 385 aaKnown RBP15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 EHD1Q9H4M9 534 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 CALHM2Q9HA72 323 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 MS4A12Q9NXJ0 267 aa15.9■□□□□ 0.14
CHMP4A-211ENST00000609024 MBD3L4A6NDZ8 208 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 MBD3L3A6NE82 208 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 MBD3L5A6NJ08 208 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 KDM4EB2RXH2 506 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 FGF17O60258 216 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 CYP4B1P13584 511 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 HIST1H1TP22492 207 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 ATP5A1P25705 553 aaKnown RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 TMED10P49755 219 aaKnown RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 SLC12A2P55011 1212 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 DIO3P55073 304 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 HERVK_113P63132 956 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 ERVK-8P63133 956 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 TSNQ15631 228 aaKnown RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 TMEM35AQ53FP2 167 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 VASNQ6EMK4 673 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 KRTAP1-3Q8IUG1 177 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 MBD3L2Q8NHZ7 208 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 TANKQ92844 425 aa15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 ABTB1Q969K4 478 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-211ENST00000609024 UBE2E3Q969T4 207 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms