RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 FOXB2Q5VYV0 432 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 HACD2Q6Y1H2 254 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 ZNF551Q7Z340 670 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-221ENST00000608903 C10orf111Q8N326 155 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 OR51Q1Q8NH59 317 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 ANKRD9Q96BM1 317 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-221ENST00000608903 AURKBQ96GD4 344 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-221ENST00000608903 ZNF764Q96H86 408 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-221ENST00000608903 CCDC115Q96NT0 180 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 GBP5Q96PP8 586 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 ZNF184Q99676 751 aaPredicted RBP10.88□□□□□ -0.67
CTCFL-221ENST00000608903 NDC1Q9BTX1 674 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 FAIM2Q9BWQ8 316 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 RPF2Q9H7B2 306 aaKnown RBP10.88□□□□□ -0.67
CTCFL-221ENST00000608903 FANCEQ9HB96 536 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 SLC35C2Q9NQQ7 365 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 FAM120CQ9NX05 1096 aaKnown RBP10.88□□□□□ -0.67
CTCFL-221ENST00000608903 CMTM6Q9NX76 183 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 EHD3Q9NZN3 535 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 PHF11Q9UIL8 331 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 PCDHB14Q9Y5E9 798 aa10.88□□□□□ -0.67
CTCFL-221ENST00000608903 MAGEA13PA6NCF6 341 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 H0YIG0 161 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 RNASET2O00584 256 aaKnown RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 ACOT8O14734 319 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 FGF17O60258 216 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 B4GALT2O60909 372 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 LDB3O75112 727 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 SCRG1O75711 98 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 TCN1P20061 433 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 ZNF10P21506 573 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 SLC6A2P23975 617 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 FEN1P39748 380 aaKnown RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 BTG2P78543 158 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 GAB1Q13480 694 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 RABL3Q5HYI8 236 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 RNF220Q5VTB9 566 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 RHBDD2Q6NTF9 364 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 DHDDSQ86SQ9 333 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 TMEM126BQ8IUX1 230 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 DOK4Q8TEW6 326 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 STARD8Q92502 1023 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 PRPF18Q99633 342 aaKnown RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 TMEM121BQ9BXQ6 578 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 GLIPR2Q9H4G4 154 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 FBXO8Q9NRD0 319 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 LANCL2Q9NS86 450 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 SIRT3Q9NTG7 399 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 BTNL2Q9UIR0 455 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 CROTQ9UKG9 612 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 LOXL2Q9Y4K0 774 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 KNTC1P50748 2209 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 PTPRZ1P23471 2315 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 A0A096LPI6 279 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 A0A1B0GX78 115 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 A0A1W2PRB8 838 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 MYO1GB0I1T2 1018 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 GUCY1B2O75343 617 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 ERAL1O75616 437 aaKnown RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 CDC123O75794 336 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 CSRP1P21291 193 aaKnown RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 RORAP35398 523 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 AVPR1BP47901 424 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 CDK9P50750 372 aaKnown RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 ARSFP54793 590 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 CEBPEQ15744 281 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 C6orf10Q5SRN2 563 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 NANOGP8Q6NSW7 305 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 MSANTD1Q6ZTZ1 278 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 PPP1R3BQ86XI6 285 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 SLC15A3Q8IY34 581 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 CCDC116Q8IYX3 515 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 PCYOX1LQ8NBM8 494 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 JADE3Q92613 823 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 ROPN1LQ96C74 230 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 ITCHQ96J02 903 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 AMDHD1Q96NU7 426 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 NR1H4Q96RI1 486 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-221ENST00000608903 CGREF1Q99674 301 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 NANOGQ9H9S0 305 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 NDE1Q9NXR1 346 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 ADA2Q9NZK5 511 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 USP22Q9UPT9 525 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 MAPRE3Q9UPY8 281 aa10.87□□□□□ -0.67
CTCFL-221ENST00000608903 DMXL1Q9Y485 3027 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 PRORSD1PA6NEY8 169 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 B4E171 279 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 NME4O00746 187 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 POLR1CO15160 346 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 CNOT3O75175 753 aaKnown RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 ABCB1P08183 1280 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 RNH1P13489 461 aaKnown RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 ME2P23368 584 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 RPL3P39023 403 aaKnown RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 BUD31P41223 144 aaPredicted RBP10.86□□□□□ -0.67
CTCFL-221ENST00000608903 TSPAN7P41732 249 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 XCR1P46094 333 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 FOLH1Q04609 750 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 IL11RAQ14626 422 aa10.86□□□□□ -0.67
CTCFL-221ENST00000608903 LTB4RQ15722 352 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms