RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 PUM1Q14671 1186 aaKnown RBP eCLIP4.85□□□□□ -1.63
SSX9-202ENST00000608568 KCNAB1Q14722 419 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 RPS6KA2Q15349 733 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 ZNF124Q15973 351 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 TAF12Q16514 161 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 PFKFB4Q16877 469 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 C21orf62-AS1Q17RA5 79 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 MICBQ29980 383 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 FAM83EQ2M2I3 478 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 LBHQ53QV2 105 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 CCDC157Q569K6 752 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 RNLSQ5VYX0 342 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 KIAA1614Q5VZ46 1190 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 B3GNTL1Q67FW5 361 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 TXNRD3NBQ6F5E7 133 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SLC27A4Q6P1M0 643 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 TMEM107Q6UX40 140 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 CFAP77Q6ZQR2 320 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 RTL4Q6ZR62 310 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 ARHGAP36Q6ZRI8 547 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 CUZD1Q86UP6 607 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 PIGZQ86VD9 579 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 THNSL2Q86YJ6 484 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 MIB1Q86YT6 1006 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SPATA2LQ8IUW3 424 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 NAXDQ8IW45 347 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 THEM5Q8N1Q8 247 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 PLD6Q8N2A8 252 aaKnown RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 FSTL5Q8N475 847 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 CPA6Q8N4T0 437 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 FRMD1Q8N878 549 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 UXS1Q8NBZ7 420 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 C19orf18Q8NEA5 215 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 OR6M1Q8NGM8 313 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SCAMP5Q8TAC9 235 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 ELP5Q8TE02 316 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 UBASH3BQ8TF42 649 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 MRPS31Q92665 395 aaKnown RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 ISG20Q96AZ6 181 aaKnown RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 RAD51AP1Q96B01 352 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 C19orf60Q96EN9 201 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 TSPAN17Q96FV3 270 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 EXOC2Q96KP1 924 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 QRFPRQ96P65 431 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 MOGAT1Q96PD6 335 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 NEDD4LQ96PU5 975 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 OR5M11Q96RB7 305 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 MCCC1Q96RQ3 725 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 NELL2Q99435 816 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 NPAS1Q99742 590 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SPOCK3Q9BQ16 436 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 ACBD6Q9BR61 282 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 COPS4Q9BT78 406 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 MED18Q9BUE0 208 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 CDCA4Q9BXL8 241 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 TPSD1Q9BZJ3 242 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 HEXA-AS1Q9H8Q6 139 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SLC52A3Q9NQ40 469 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 FSCN3Q9NQT6 498 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SEMA4GQ9NTN9 838 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 TDP1Q9NUW8 608 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SIRT5Q9NXA8 310 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 CNOT2Q9NZN8 540 aaKnown RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 COPZ2Q9P299 210 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SAE1Q9UBE0 346 aaPredicted RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 PSORS1C1Q9UIG5 152 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 PLCL2Q9UPR0 1127 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 ASB1Q9Y576 335 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 PCDHB14Q9Y5E9 798 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 ALG5Q9Y673 324 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 UNC13CQ8NB66 2214 aa4.85□□□□□ -1.63
SSX9-202ENST00000608568 SETXQ7Z333 2677 aaKnown RBP4.85□□□□□ -1.63
SSX9-202ENST00000608568 TRAV19A0A0A6YYK7 116 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 C17orf113A0A1B0GUU1 675 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 C7orf66A4D0T2 115 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 ZNF840PA6NDX5 716 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 CLCA1A8K7I4 914 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 METTL12A8MUP2 240 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 PATE3B3GLJ2 98 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 M0R082 166 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 AIPO00170 330 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 LEFTY2O00292 366 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 AP3D1O14617 1153 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 CASC3O15234 703 aaKnown RBP4.84□□□□□ -1.63
SSX9-202ENST00000608568 COCHO43405 550 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 AKAP8O43823 692 aaKnown RBP4.84□□□□□ -1.63
SSX9-202ENST00000608568 RPP40O75818 363 aaKnown RBP4.84□□□□□ -1.63
SSX9-202ENST00000608568 SCO1O75880 301 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 CCNDBP1O95273 360 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 METTL18O95568 372 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 IL6P05231 212 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 PGRP06401 933 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 FABP1P07148 127 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 FGF2P09038 288 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 ACSM4P0C7M7 580 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 PRR35P0CG20 571 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 IRF1P10914 325 aa4.84□□□□□ -1.63
SSX9-202ENST00000608568 PIPP12273 146 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms