RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 DDX49Q9Y6V7 483 aaKnown RBP3.62□□□□□ -1.83
AC004542.1-201ENST00000602955 STK36Q9NRP7 1315 aa3.62□□□□□ -1.83
AC004542.1-201ENST00000602955 IGHV4-4A0A075B6R2 117 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 FAM172BPA6NC97 362 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 RNF222A6NCQ9 220 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 GLTPD2A6NH11 291 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 P2RY10O00398 339 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 SURF4O15260 269 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 GMFGO60234 142 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 TRMUO75648 421 aaKnown RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 NTN1O95631 604 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 LYNP07948 512 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ASNSP08243 561 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 DRD5P21918 477 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 PAICSP22234 425 aaKnown RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 GIFP27352 417 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 LEPRP48357 1165 aaKnown RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 NDST1P52848 882 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 XGP55808 180 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 GUCY2DQ02846 1103 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 CHIT1Q13231 466 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 RIGQ13278 110 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 GPM6BQ13491 265 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ZKSCAN8Q15776 578 aaPredicted RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 LRIT3Q3SXY7 679 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ACSF3Q4G176 576 aaPredicted RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ATAD3BQ5T9A4 648 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 LRRC8BQ6P9F7 803 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 Q6ZRG5 221 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ERASQ7Z444 233 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 SMIM29Q86T20 159 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 VASH2Q86V25 355 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 VPS36Q86VN1 386 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 MLKLQ8NB16 471 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 STKLD1Q8NE28 680 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF397Q8NF99 534 aaPredicted RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 OR5M9Q8NGP3 310 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 RDH11Q8TC12 318 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 TCP11Q8WWU5 503 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 SHC3Q92529 594 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 PINX1Q96BK5 328 aaKnown RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF524Q96C55 264 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 COG3Q96JB2 828 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 FAM218AQ96MZ4 157 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 IWS1Q96ST2 819 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 RAB11FIP5Q9BXF6 653 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF334Q9HCZ1 680 aaPredicted RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF71Q9NQZ8 489 aaPredicted RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 DCAF16Q9NXF7 216 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 MRPS7Q9Y2R9 242 aaKnown RBP3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 KLHDC2Q9Y2U9 406 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 ZNF175Q9Y473 711 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 KIAA1217Q5T5P2 1943 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 KIF7Q2M1P5 1343 aa3.61□□□□□ -1.83
AC004542.1-201ENST00000602955 MEI4A8MW99 385 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 SH2D1BO14796 132 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MAGEB3O15480 346 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 TSPAN2O60636 221 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 TBX19O60806 448 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 CEACAM4O75871 244 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 KRT36O76013 467 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 OR4F21O95013 312 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 HPRP00739 348 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 CALCAP01258 141 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 FCER2P06734 321 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 CA3P07451 260 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 PRSS1P07477 247 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 HMBSP08397 361 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 PDHBP11177 359 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MBL2P11226 248 aaPredicted RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 CYP11B1P15538 503 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 GLRA2P23416 452 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 EDNRAP25101 427 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 AXLP30530 894 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MAT2AP31153 395 aaKnown RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 GPR183P32249 361 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MATKP42679 507 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 HMGN5P82970 282 aaKnown RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 NAAAQ02083 359 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 KLF5Q13887 457 aaPredicted RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 SPATA46Q5T0L3 261 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 NCR3LG1Q68D85 454 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 SLC39A4Q6P5W5 647 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 PAQR9Q6ZVX9 377 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 ASRGL1Q7L266 308 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 ZDHHC17Q8IUH5 632 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 GRAMD2AQ8IUY3 354 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 ZDHHC21Q8IVQ6 265 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 OR4N5Q8IXE1 308 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 GVQW1Q8N7I0 195 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 TMEM178AQ8NBL3 297 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 TRIM58Q8NG06 486 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 WDR36Q8NI36 951 aaKnown RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MAPK15Q8TD08 544 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 GIPC3Q8TF64 312 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 SCARB1Q8WTV0 552 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 SMAP2Q8WU79 429 aaPredicted RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 MRPL24Q96A35 216 aaKnown RBP3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 AZIN2Q96A70 460 aa3.6□□□□□ -1.83
AC004542.1-201ENST00000602955 CAPNS2Q96L46 248 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms