RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CD300AQ9UGN4 299 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 ERVK-11Q9UQG0 969 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 SNX8Q9Y5X2 465 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 GPR75O95800 540 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 FHP07954 510 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 HSD17B1P14061 328 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 TCN1P20061 433 aaPredicted RBP21.24■□□□□ 0.99
IRF3-228ENST00000601291 IL10P22301 178 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 LIPEQ05469 1076 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 SELPLGQ14242 412 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 C1orf146Q5VVC0 180 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 NET1Q7Z628 596 aaPredicted RBP21.24■□□□□ 0.99
IRF3-228ENST00000601291 PSMA8Q8TAA3 256 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 SUN3Q8TAQ9 357 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 CXorf36Q9H7Y0 433 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 APMAPQ9HDC9 416 aa21.24■□□□□ 0.99
IRF3-228ENST00000601291 B4E171 279 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 FGF17O60258 216 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 LDB3O75112 727 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 CPMP14384 443 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 CHI3L1P36222 383 aaPredicted RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 TSPAN7P41732 249 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 ISXQ2M1V0 245 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 ZNF750Q32MQ0 723 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 SPDYE7PQ495Y7 208 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 OR4N5Q8IXE1 308 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 ZFP90Q8TF47 636 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 DEPDC7Q96QD5 511 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 CTRCQ99895 268 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 KCTD14Q9BQ13 255 aaPredicted RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 DPH2Q9BQC3 489 aaPredicted RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 PRTFDC1Q9NRG1 225 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 TRPC4Q9UBN4 977 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 GMEB1Q9Y692 573 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 COL27A1Q8IZC6 1860 aaPredicted RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 RNF103-CHMP3A0A140T963 221 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 B4GALT2O60909 372 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 CPNE3O75131 537 aaKnown RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 SORBS2O94875 1100 aaKnown RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 TIAF1O95411 115 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 KRT75O95678 551 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 MT-CO3P00414 261 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 CCL4P13236 92 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 PORP16435 677 aaPredicted RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 GSK3BP49841 420 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 CDK9P50750 372 aaKnown RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 HSD17B7P56937 341 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 SLC13A2Q13183 592 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 ANGPTL8Q6UXH0 198 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 ASCL5Q7RTU5 278 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 SHISA5Q8N114 240 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 ASB9Q96DX5 294 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 RAD21L1Q9H4I0 556 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 IKZF5Q9H5V7 419 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 KAT8Q9H7Z6 458 aaKnown RBP21.23■□□□□ 0.99
IRF3-228ENST00000601291 SLC39A1Q9NY26 324 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 POMPQ9Y244 141 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 LOXL2Q9Y4K0 774 aa21.23■□□□□ 0.99
IRF3-228ENST00000601291 CTNSO60931 367 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 CSO75390 466 aaKnown RBP21.22■□□□□ 0.99
IRF3-228ENST00000601291 STAMBPO95630 424 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 ELF3P78545 371 aaPredicted RBP21.22■□□□□ 0.99
IRF3-228ENST00000601291 DUSP2Q05923 314 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 ABHD18Q0P651 414 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 BNIP2Q12982 314 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 DHRS13Q6UX07 377 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 IFNEQ86WN2 208 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 FAM156AQ8NDB6 213 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 OR10A6Q8NH74 314 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 OR5AK3PQ8NH89 298 aa21.22■□□□□ 0.99
IRF3-228ENST00000601291 FAM120BQ96EK7 910 aaKnown RBP21.22■□□□□ 0.99
IRF3-228ENST00000601291 LIN37Q96GY3 246 aaPredicted RBP21.22■□□□□ 0.99
IRF3-228ENST00000601291 MKKSQ9NPJ1 570 aaPredicted RBP21.22■□□□□ 0.99
IRF3-228ENST00000601291 SIRT3Q9NTG7 399 aaPredicted RBP21.22■□□□□ 0.99
IRF3-228ENST00000601291 A0A1W2PS29 197 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 CDC123O75794 336 aaPredicted RBP21.21■□□□□ 0.99
IRF3-228ENST00000601291 NTRK1P04629 796 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 ATXN8OSP0DMR3 200 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 GPX2P18283 190 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 RAB15P59190 212 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 ID2Q02363 134 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 STX4Q12846 297 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 TRIM25Q14258 630 aaKnown RBP21.21■□□□□ 0.99
IRF3-228ENST00000601291 CEACAM20Q6UY09 585 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 TMEM64Q6YI46 380 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 MED25Q71SY5 747 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 CLEC4FQ8N1N0 589 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 TNIP2Q8NFZ5 429 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 OR9A2Q8NGT5 310 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 PNPT1Q8TCS8 783 aaKnown RBP21.21■□□□□ 0.99
IRF3-228ENST00000601291 ANKRD9Q96BM1 317 aaPredicted RBP21.21■□□□□ 0.99
IRF3-228ENST00000601291 MOAP1Q96BY2 351 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 TRIM4Q9C037 500 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 BCAP29Q9UHQ4 241 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 ACSL6Q9UKU0 697 aa21.21■□□□□ 0.99
IRF3-228ENST00000601291 SLC34A2O95436 690 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 ATP1B1P05026 303 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 CCT3P49368 545 aaKnown RBP21.2■□□□□ 0.98
IRF3-228ENST00000601291 DCDP81605 110 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms