RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PLIN5Q00G26 463 aa15.07■□□□□ 0
LSM4-206ENST00000600289 SPRED3Q2MJR0 410 aa15.07■□□□□ 0
LSM4-206ENST00000600289 SPIN4Q56A73 249 aa15.07■□□□□ 0
LSM4-206ENST00000600289 CCNYL2Q5T2Q4 361 aa15.07■□□□□ 0
LSM4-206ENST00000600289 GALNT18Q6P9A2 607 aa15.07■□□□□ 0
LSM4-206ENST00000600289 CATSPER1Q8NEC5 780 aa15.07■□□□□ 0
LSM4-206ENST00000600289 OR1N1Q8NGS0 311 aa15.07■□□□□ 0
LSM4-206ENST00000600289 OR8K3Q8NH51 312 aa15.07■□□□□ 0
LSM4-206ENST00000600289 NCLNQ969V3 563 aa15.07■□□□□ 0
LSM4-206ENST00000600289 C11orf24Q96F05 449 aaPredicted RBP15.07■□□□□ 0
LSM4-206ENST00000600289 PGM2Q96G03 612 aa15.07■□□□□ 0
LSM4-206ENST00000600289 CNDP1Q96KN2 507 aa15.07■□□□□ 0
LSM4-206ENST00000600289 KCNA7Q96RP8 456 aa15.07■□□□□ 0
LSM4-206ENST00000600289 HBEGFQ99075 208 aa15.07■□□□□ 0
LSM4-206ENST00000600289 GATA5Q9BWX5 397 aaPredicted RBP15.07■□□□□ 0
LSM4-206ENST00000600289 DEFB126Q9BYW3 111 aa15.07■□□□□ 0
LSM4-206ENST00000600289 TEX10Q9NXF1 929 aaPredicted RBP15.07■□□□□ 0
LSM4-206ENST00000600289 PLA2G3Q9NZ20 509 aa15.07■□□□□ 0
LSM4-206ENST00000600289 LUZP4Q9P127 313 aa15.07■□□□□ 0
LSM4-206ENST00000600289 SLC17A7Q9P2U7 560 aa15.07■□□□□ 0
LSM4-206ENST00000600289 MCM8Q9UJA3 840 aa15.07■□□□□ 0
LSM4-206ENST00000600289 TIMM22Q9Y584 194 aa15.07■□□□□ 0
LSM4-206ENST00000600289 ACTL7BQ9Y614 415 aa15.07■□□□□ 0
LSM4-206ENST00000600289 AKAP9Q99996 3911 aa15.07■□□□□ 0
LSM4-206ENST00000600289 RP1L1Q8IWN7 2480 aaPredicted RBP15.06■□□□□ 0
LSM4-206ENST00000600289 TRBV11-1A0A0K0K1C0 115 aa15.06■□□□□ 0
LSM4-206ENST00000600289 C1orf226A1L170 272 aa15.06■□□□□ 0
LSM4-206ENST00000600289 C17orf105B2RV13 164 aa15.06■□□□□ 0
LSM4-206ENST00000600289 NPIPB8E9PQR5 432 aa15.06■□□□□ 0
LSM4-206ENST00000600289 PRAMEF2O60811 474 aa15.06■□□□□ 0
LSM4-206ENST00000600289 SPAG7O75391 227 aa15.06■□□□□ 0
LSM4-206ENST00000600289 PRKRAO75569 313 aaKnown RBP15.06■□□□□ 0
LSM4-206ENST00000600289 DDAH2O95865 285 aa15.06■□□□□ 0
LSM4-206ENST00000600289 GBAP04062 536 aa15.06■□□□□ 0
LSM4-206ENST00000600289 IFNA16P05015 189 aa15.06■□□□□ 0
LSM4-206ENST00000600289 UROSP10746 265 aa15.06■□□□□ 0
LSM4-206ENST00000600289 ALOX15P16050 662 aaPredicted RBP15.06■□□□□ 0
LSM4-206ENST00000600289 CREB1P16220 341 aa15.06■□□□□ 0
LSM4-206ENST00000600289 ALDH3A1P30838 453 aa15.06■□□□□ 0
LSM4-206ENST00000600289 SERPINB5P36952 375 aa15.06■□□□□ 0
LSM4-206ENST00000600289 ETV4P43268 484 aa15.06■□□□□ 0
LSM4-206ENST00000600289 GSTM5P46439 218 aa15.06■□□□□ 0
LSM4-206ENST00000600289 MAPK12P53778 367 aa15.06■□□□□ 0
LSM4-206ENST00000600289 TUBA3CQ13748 450 aa15.06■□□□□ 0
LSM4-206ENST00000600289 ESPL1Q14674 2120 aa15.06■□□□□ 0
LSM4-206ENST00000600289 KRTAP21-3Q3LHN1 58 aa15.06■□□□□ 0
LSM4-206ENST00000600289 PRR30Q53SZ7 412 aaPredicted RBP15.06■□□□□ 0
LSM4-206ENST00000600289 FHL5Q5TD97 284 aa15.06■□□□□ 0
LSM4-206ENST00000600289 NDUFAF5Q5TEU4 345 aa15.06■□□□□ 0
LSM4-206ENST00000600289 FAM219BQ5XKK7 198 aa15.06■□□□□ 0
LSM4-206ENST00000600289 FCRLBQ6BAA4 426 aa15.06■□□□□ 0
LSM4-206ENST00000600289 TUBA3EQ6PEY2 450 aa15.06■□□□□ 0
LSM4-206ENST00000600289 TRIM46Q7Z4K8 759 aa15.06■□□□□ 0
LSM4-206ENST00000600289 C1orf52Q8N6N3 182 aaKnown RBP15.06■□□□□ 0
LSM4-206ENST00000600289 GALNT11Q8NCW6 608 aa15.06■□□□□ 0
LSM4-206ENST00000600289 MDS2Q8NDY4 140 aa15.06■□□□□ 0
LSM4-206ENST00000600289 SNRNP40Q96DI7 357 aaKnown RBP15.06■□□□□ 0
LSM4-206ENST00000600289 METTL2AQ96IZ6 378 aaKnown RBP15.06■□□□□ 0
LSM4-206ENST00000600289 ART5Q96L15 291 aa15.06■□□□□ 0
LSM4-206ENST00000600289 DGAT2Q96PD7 388 aa15.06■□□□□ 0
LSM4-206ENST00000600289 UTP23Q9BRU9 249 aaKnown RBP15.06■□□□□ 0
LSM4-206ENST00000600289 CDCP1Q9H5V8 836 aa15.06■□□□□ 0
LSM4-206ENST00000600289 RYDENQ9NUL5 291 aaKnown RBP15.06■□□□□ 0
LSM4-206ENST00000600289 GABRR3A8MPY1 467 aa15.05■□□□□ -0
LSM4-206ENST00000600289 FCHO1O14526 889 aa15.05■□□□□ -0
LSM4-206ENST00000600289 MAN1A2O60476 641 aa15.05■□□□□ -0
LSM4-206ENST00000600289 SEMA7AO75326 666 aa15.05■□□□□ -0
LSM4-206ENST00000600289 ZFAND5O76080 213 aa15.05■□□□□ -0
LSM4-206ENST00000600289 IGKV3-11P04433 115 aa15.05■□□□□ -0
LSM4-206ENST00000600289 SLC35E2P0CK97 266 aa15.05■□□□□ -0
LSM4-206ENST00000600289 CHN1P15882 459 aa15.05■□□□□ -0
LSM4-206ENST00000600289 PRPH2P23942 346 aa15.05■□□□□ -0
LSM4-206ENST00000600289 BEND6Q5SZJ8 279 aaPredicted RBP15.05■□□□□ -0
LSM4-206ENST00000600289 CEP85LQ5SZL2 805 aa15.05■□□□□ -0
LSM4-206ENST00000600289 EXOC3L1Q86VI1 746 aa15.05■□□□□ -0
LSM4-206ENST00000600289 OR4N5Q8IXE1 308 aa15.05■□□□□ -0
LSM4-206ENST00000600289 OR6Y1Q8NGX8 325 aa15.05■□□□□ -0
LSM4-206ENST00000600289 SUN3Q8TAQ9 357 aa15.05■□□□□ -0
LSM4-206ENST00000600289 SLC2A12Q8TD20 617 aa15.05■□□□□ -0
LSM4-206ENST00000600289 ZNF721Q8TF20 911 aa15.05■□□□□ -0
LSM4-206ENST00000600289 SREK1Q8WXA9 508 aaKnown RBP15.05■□□□□ -0
LSM4-206ENST00000600289 SCMH1Q96GD3 660 aa15.05■□□□□ -0
LSM4-206ENST00000600289 RBM18Q96H35 190 aaKnown RBP15.05■□□□□ -0
LSM4-206ENST00000600289 FBXL20Q96IG2 436 aa15.05■□□□□ -0
LSM4-206ENST00000600289 TNFRSF12AQ9NP84 129 aa15.05■□□□□ -0
LSM4-206ENST00000600289 CES1P1Q9UKY3 287 aa15.05■□□□□ -0
LSM4-206ENST00000600289 PCDHA9Q9Y5H5 950 aa15.05■□□□□ -0
LSM4-206ENST00000600289 COPG1Q9Y678 874 aaKnown RBP15.05■□□□□ -0
LSM4-206ENST00000600289 EXPH5Q8NEV8 1989 aa15.05■□□□□ -0
LSM4-206ENST00000600289 CNTRLQ7Z7A1 2325 aa15.05■□□□□ -0
LSM4-206ENST00000600289 TMEM200CA6NKL6 621 aa15.04■□□□□ -0
LSM4-206ENST00000600289 PGRMC2O15173 223 aa15.04■□□□□ -0
LSM4-206ENST00000600289 CTIFO43310 598 aaKnown RBP15.04■□□□□ -0
LSM4-206ENST00000600289 DYRK3O43781 588 aa15.04■□□□□ -0
LSM4-206ENST00000600289 RSL1D1O76021 490 aaKnown RBP15.04■□□□□ -0
LSM4-206ENST00000600289 BPGMP07738 259 aa15.04■□□□□ -0
LSM4-206ENST00000600289 FGF4P08620 206 aa15.04■□□□□ -0
LSM4-206ENST00000600289 TNNI3P19429 210 aa15.04■□□□□ -0
LSM4-206ENST00000600289 TIA1P31483 386 aaKnown RBP eCLIP15.04■□□□□ -01e-8■■■□□ 17.7
LSM4-206ENST00000600289 CD96P40200 585 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms