RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 NUDT13Q86X67 352 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 MCEMP1Q8IX19 187 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 DND1Q8IYX4 353 aaKnown RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 PTGR2Q8N8N7 351 aaPredicted RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 NOA1Q8NC60 698 aaKnown RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 OR52N2Q8NGI0 321 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 ZNF592Q92610 1267 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 MTFMTQ96DP5 389 aaKnown RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 PHF21BQ96EK2 531 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 FBXL20Q96IG2 436 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 MRPL57Q9BQC6 102 aaKnown RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 ZDHHC11Q9H8X9 412 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 SACM1LQ9NTJ5 587 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 ZNF358Q9NW07 568 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 A0A087WUV0 522 aaPredicted RBP14.62□□□□□ -0.07
VRK3-221ENST00000600284 OR7A17O14581 309 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 TMPRSS11DO60235 418 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 CDC40O60508 579 aaKnown RBP eCLIP14.62□□□□□ -0.07
VRK3-221ENST00000600284 EEDO75530 441 aaKnown RBP14.62□□□□□ -0.07
VRK3-221ENST00000600284 GLSO94925 669 aaPredicted RBP14.62□□□□□ -0.07
VRK3-221ENST00000600284 P04436 131 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 TPOP07202 933 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 PRF1P14222 555 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 COX6B1P14854 86 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 ECHS1P30084 290 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 NEK2P51955 445 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 PLGLB1Q02325 96 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 HYAL4Q2M3T9 481 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 GGTA1PQ4G0N0 100 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 LGSNQ5TDP6 509 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 FRG2Q64ET8 278 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 C9orf40Q8IXQ3 194 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 MYRIPQ8NFW9 859 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 SLC22A8Q8TCC7 542 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 DCAKDQ8WVC6 231 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 PPWD1Q96BP3 646 aaKnown RBP14.62□□□□□ -0.07
VRK3-221ENST00000600284 FRG2BQ96QU4 278 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 TTTY12Q9BZ98 90 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 IL1RL2Q9HB29 575 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 AHSPQ9NZD4 102 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 XPR1Q9UBH6 696 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 ADAM29Q9UKF5 820 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 PCTPQ9UKL6 214 aa14.62□□□□□ -0.07
VRK3-221ENST00000600284 IQANK1A0A1B0GTG1 560 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 A0A1W2PR48 441 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 PINLYPA6NC86 204 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 OR6C76A6NM76 312 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 POC1B-GALNT4F8VUJ3 575 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 KIF2AO00139 706 aaPredicted RBP14.61□□□□□ -0.07
VRK3-221ENST00000600284 ZNHIT1O43257 154 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 ZNF354AO60765 605 aaPredicted RBP14.61□□□□□ -0.07
VRK3-221ENST00000600284 SLC35E2P0CK97 266 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 NR2F6P10588 404 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 ARL1P40616 181 aaPredicted RBP14.61□□□□□ -0.07
VRK3-221ENST00000600284 ASPHQ12797 758 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 ZNF791Q3KP31 576 aaPredicted RBP14.61□□□□□ -0.07
VRK3-221ENST00000600284 SLC22A10Q63ZE4 541 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 TTC19Q6DKK2 380 aaPredicted RBP14.61□□□□□ -0.07
VRK3-221ENST00000600284 DGAT2L6Q6ZPD8 337 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 CD163Q86VB7 1156 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 CNPY4Q8N129 248 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 OR52B6Q8NGF0 335 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 RIT1Q92963 219 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 C1QTNF3Q9BXJ4 246 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 DEFB127Q9H1M4 99 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 MRPL46Q9H2W6 279 aaKnown RBP14.61□□□□□ -0.07
VRK3-221ENST00000600284 TP63Q9H3D4 680 aaPredicted RBP14.61□□□□□ -0.07
VRK3-221ENST00000600284 ZBTB26Q9HCK0 441 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 COQ3Q9NZJ6 369 aa14.61□□□□□ -0.07
VRK3-221ENST00000600284 PCNX1Q96RV3 2341 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 CREBBPQ92793 2442 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 OR14I1A6ND48 311 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 TRIM49D1C9J1S8 452 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 OR10H2O60403 315 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 PDE9AO76083 593 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 AIFM1O95831 613 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 IGHG3P01860 377 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 SNRPAP09012 282 aaKnown RBP14.6□□□□□ -0.07
VRK3-221ENST00000600284 TNFRSF8P28908 595 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 SLC37A1P57057 533 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 FOXO1Q12778 655 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 IFT88Q13099 833 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 TRAF3Q13114 568 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 OR52E8Q6IFG1 317 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 C3P1Q6ZMU1 363 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 FAM47EQ6ZV65 393 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 SLC29A4Q7RTT9 530 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 PAGE2Q7Z2X7 111 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 GDF7Q7Z4P5 450 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 MILR1Q7Z6M3 343 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 FAM109AQ8N4B1 249 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 TRPC4APQ8TEL6 797 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 PAQR8Q8TEZ7 354 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 CDK15Q96Q40 435 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 SH2D2AQ9NP31 389 aa14.6□□□□□ -0.07
VRK3-221ENST00000600284 A0A1B0GVC2 190 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 GLOD5A6NK44 160 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 FAM166BA8MTA8 275 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 HRKO00198 91 aa14.59□□□□□ -0.07
VRK3-221ENST00000600284 GUCY1B2O75343 617 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms