RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 KCNC4Q03721 635 aa20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 DCTN2Q13561 401 aaKnown RBP20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 KIAA1324Q6UXG2 1013 aaKnown RBP20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 USP30Q70CQ3 517 aa20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 AMIGO1Q86WK6 493 aa20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 OR5D16Q8NGK9 328 aa20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 ASB12Q8WXK4 309 aa20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 SARGQ9BW04 601 aa20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 ZNF624Q9P2J8 865 aaPredicted RBP20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 PSME2Q9UL46 239 aa20.48■□□□□ 0.87
GRAMD1A-212ENST00000600231 ARHGEF17Q96PE2 2063 aaPredicted RBP20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 FFAR1O14842 300 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 ATP5A1P25705 553 aaKnown RBP20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 LTBRP36941 435 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 NCBP2P52298 156 aaKnown RBP eCLIP20.47■□□□□ 0.872e-11■■□□□ 12.9
GRAMD1A-212ENST00000600231 KIAA1024LP59773 190 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 RAB8AP61006 207 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 HPCAP84074 193 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 TFF2Q03403 129 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 NFATC4Q14934 902 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 ZNF750Q32MQ0 723 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 TOR1AIP1Q5JTV8 583 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 ZNF425Q6IV72 752 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 OR2L5Q8NG80 312 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 PHF10Q8WUB8 498 aaKnown RBP20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 GPN2Q9H9Y4 310 aaPredicted RBP20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 FBXW2Q9UKT8 454 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 POFUT2Q9Y2G5 429 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 KNL1Q8NG31 2342 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 SCN3AQ9NY46 2000 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 MT-ND2P03891 347 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 CHRM5P08912 532 aaPredicted RBP20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 ALPPL2P10696 532 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 GGT2P36268 569 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 MASP1P48740 699 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 BNIP3Q12983 259 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 SYPL1Q16563 259 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 MRM1Q6IN84 353 aaKnown RBP20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 SLC16A12Q6ZSM3 486 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 FAM81AQ8TBF8 368 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 XAGE5Q8WWM1 108 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 RORBQ92753 470 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 TANKQ92844 425 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 DNASE1L2Q92874 299 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 FCRL4Q96PJ5 515 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 BBS4Q96RK4 519 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 ZCCHC3Q9NUD5 404 aaKnown RBP20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 HCN4Q9Y3Q4 1203 aa20.47■□□□□ 0.87
GRAMD1A-212ENST00000600231 HOXC4P09017 264 aaPredicted RBP20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 CERS1P27544 350 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 PXNP49023 591 aaPredicted RBP20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 ENTPD1P49961 510 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 EMP3P54852 163 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 TMEM92Q6UXU6 159 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 TMEM168Q9H0V1 697 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 OR51I1Q9H343 314 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 OR6C2Q9NZP2 312 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 APOBEC3BQ9UH17 382 aaKnown RBP20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 RGS10O43665 173 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 SEMA7AO75326 666 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 NDUFV2P19404 249 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 C18orf63Q68DL7 685 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 CCDC81Q6ZN84 652 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 AHSA2Q719I0 299 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 TBC1D19Q8N5T2 526 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 GTPBP3Q969Y2 492 aaKnown RBP20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 CNRIP1Q96F85 164 aaPredicted RBP20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 OTUB1Q96FW1 271 aaPredicted RBP20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 WDR92Q96MX6 357 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 ALPK1Q96QP1 1244 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 TREX2Q9BQ50 279 aaPredicted RBP20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 PRUNE2Q8WUY3 3088 aa20.46■□□□□ 0.87
GRAMD1A-212ENST00000600231 A0A1W2PS29 197 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 SLC28A2O43868 658 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 KDM1AO60341 852 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 ZBTB11O95625 1053 aaPredicted RBP20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 ACVR2AP27037 513 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 ACTR1BP42025 376 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 IDH2P48735 452 aaKnown RBP20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 PRKAG1P54619 331 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 ACTR1AP61163 376 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 DUSP2Q05923 314 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 GPR19Q15760 415 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 CCDC116Q8IYX3 515 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 MFSD9Q8NBP5 474 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 PROX1Q92786 737 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 SLC35G5Q96KT7 338 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 COL21A1Q96P44 957 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 WFDC6Q9BQY6 131 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 ZNF556Q9HAH1 456 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 TRPC4Q9UBN4 977 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 SNX7Q9UNH6 387 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 A8MVJ9 347 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 BTN3A3O00478 584 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 NARSO43776 548 aaKnown RBP20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 CCNB2O95067 398 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 AIFM1O95831 613 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 FADS2O95864 444 aaKnown RBP20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 C8orf89P0DMQ9 161 aa20.45■□□□□ 0.86
GRAMD1A-212ENST00000600231 NTSP30990 170 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms