RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 CLNS1AP54105 237 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 NME5P56597 212 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 WNT3P56703 355 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 STX1BP61266 288 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 DUSP2Q05923 314 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 STX4Q12846 297 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 ZNF750Q32MQ0 723 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 CRTC2Q53ET0 693 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 CPTPQ5TA50 214 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 GKAP1Q5VSY0 366 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 PAOXQ6QHF9 649 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 LANCL3Q6ZV70 420 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 ANKRD37Q7Z713 158 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 SPACA3Q8IXA5 215 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 SAMD14Q8IZD0 417 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 ANKS4BQ8N8V4 417 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 OR8J2Q8NGG1 315 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 OR9I1Q8NGQ6 314 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 SUN3Q8TAQ9 357 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 KLHL29Q96CT2 875 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 WDR77Q9BQA1 342 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 ALOXE3Q9BYJ1 711 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 NMUR2Q9GZQ4 415 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 MYLK2Q9H1R3 596 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 SLAMF7Q9NQ25 335 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 SH3BP4Q9P0V3 963 aa11.85□□□□□ -0.51
CHMP2A-206ENST00000600118 MYOCOSA0A1B0GUC4 107 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 FAM234BA2RU67 622 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 C9JVG2 144 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 FCHO1O14526 889 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 SOCS6O14544 535 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 SCN2BO60939 215 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ERAL1O75616 437 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ATP1B1P05026 303 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 CPMP14384 443 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 CD1EP15812 388 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 DDX5P17844 614 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 PIK3R1P27986 724 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ADSLP30566 484 aaPredicted RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 GALNSP34059 522 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 STT3AP46977 705 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 PHC1P78364 1004 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 SRSF11Q05519 484 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 RCAN2Q14206 197 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 DPY19L1Q2PZI1 675 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 SPANXN4Q5MJ08 99 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 FAAH2Q6GMR7 532 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 FAM180BQ6P0A1 224 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 KIRREL2Q6UWL6 708 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 PROSER1Q86XN7 944 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ST13P4Q8IZP2 240 aaPredicted RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 NATD1Q8N6N6 113 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 METTL21AQ8WXB1 218 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 CCNL2Q96S94 520 aaPredicted RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ZBTB18Q99592 522 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 PRPF18Q99633 342 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 BHLHE41Q9C0J9 482 aaPredicted RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ACSS1Q9NUB1 689 aaPredicted RBP11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 MRGBPQ9NV56 204 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ATAD3AQ9NVI7 634 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ENTPD4Q9Y227 616 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 RAXQ9Y2V3 346 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 ZNF780BQ9Y6R6 833 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 FREM2Q5SZK8 3169 aa11.84□□□□□ -0.51
CHMP2A-206ENST00000600118 NUP210LQ5VU65 1888 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 TMEM8BA6NDV4 472 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 NDUFAB1O14561 156 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 SLC22A2O15244 555 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 PDPK1O15530 556 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 CCDC22O60826 627 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 COX6A1P12074 109 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 PORP16435 677 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 OTX2P32243 289 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 SOX18P35713 384 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 FEN1P39748 380 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 KIR3DL1P43629 444 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 POLR2JP52435 117 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 OR4D2P58180 307 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 PLIN5Q00G26 463 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 TLE3Q04726 772 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 MGAT2Q10469 447 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 UBAP2LQ14157 1087 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 MLC1Q15049 377 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 PCOLCEQ15113 449 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 TERF2Q15554 542 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 ELAVL1Q15717 326 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 FAM174BQ3ZCQ3 159 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 SFT2D3Q587I9 215 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 BLOC1S3Q6QNY0 202 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 DGAT2L6Q6ZPD8 337 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 CPEB2Q7Z5Q1 589 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 MRGPREQ86SM8 312 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 MTDHQ86UE4 582 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 LRRC25Q8N386 305 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 KDF1Q8NAX2 398 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 CCDC197Q8NCU1 140 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 OR11G2Q8NGC1 345 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 BCAS4Q8TDM0 211 aa11.83□□□□□ -0.52
CHMP2A-206ENST00000600118 PTPMT1Q8WUK0 201 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms