RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RAB23Q9ULC3 237 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 ANGPT4Q9Y264 503 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 USP34Q70CQ2 3546 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 SCN3AQ9NY46 2000 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 HMGN4O00479 90 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 BCHEP06276 602 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 JUNDP17535 347 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 FPR1P21462 350 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 MAOBP27338 520 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 NUDT1P36639 197 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 DAPP51397 102 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 KCTD21Q4G0X4 260 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 SLC48A1Q6P1K1 146 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 ZNF438Q7Z4V0 828 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 SLC44A2Q8IWA5 706 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 CCDC116Q8IYX3 515 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 FAM46DQ8NEK8 389 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 ZCCHC10Q8TBK6 192 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 RSPO3Q9BXY4 272 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 A4GALTQ9NPC4 353 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 FBXO4Q9UKT5 387 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 TRIM64A6NGJ6 449 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 OR5K4A6NMS3 321 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 C2orf74A8MZ97 194 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 DNAJB6O75190 326 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 GUCY1B2O75343 617 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 TFPTP0C1Z6 253 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 SLC35G6P0C7Q6 338 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 NTSP30990 170 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 GPC1P35052 558 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 FEN1P39748 380 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 ELOAQ14241 798 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 IFI44LQ53G44 452 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 REEP3Q6NUK4 255 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 SZRD1Q7Z422 152 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 GALNT5Q7Z7M9 940 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 MAGED4Q96JG8 741 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 REEP1Q9H902 201 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 THUMPD1Q9NXG2 353 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 PDP1Q9P0J1 537 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 PRAMEF27A3QJZ7 478 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 ANKRD33BA6NCL7 494 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 B4DGG1 531 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 RECKO95980 971 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 SMIM10L1P0DMW3 83 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 TDGF1P13385 188 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 ELK4P28324 431 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 RRM2P31350 389 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 NUBP1P53384 320 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 HHEXQ03014 270 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 TGM3Q08188 693 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 DMWDQ09019 674 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 GPR19Q15760 415 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 KLHL6Q8WZ60 621 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 SMIM10Q96HG1 83 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 TMEM19Q96HH6 336 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 TMEM74BQ9NUR3 256 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 C3orf18Q9UK00 162 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 ENTPD2Q9Y5L3 495 aa16.09■□□□□ 0.17
SHKBP1-216ENST00000598201 KMT2EQ8IZD2 1858 aa16.08■□□□□ 0.17
SHKBP1-216ENST00000598201 CCDC163A0A0D9SF12 145 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 FAM221BA6H8Z2 402 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 METTL12A8MUP2 240 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 DPM1O60762 260 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 PAX7P23759 505 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 IGFBP5P24593 272 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 YAP1P46937 504 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 NR1H2P55055 460 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 ANGPT1Q15389 498 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 DUSP7Q16829 419 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 DEFB134Q4QY38 66 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 TTC23Q5W5X9 447 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 KDM4DQ6B0I6 523 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 SHISA5Q8N114 240 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 OR5D16Q8NGK9 328 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 BAHD1Q8TBE0 780 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 LZICQ8WZA0 190 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 RSC1A1Q92681 617 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 ZFYVE21Q9BQ24 234 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 OR51I1Q9H343 314 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 RUBCNLQ9H714 662 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 ZCCHC3Q9NUD5 404 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 LYARQ9NX58 379 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 ANKMY1Q9P2S6 941 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 MRPS2Q9Y399 296 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 TESMINQ9Y4I5 508 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 KLK4Q9Y5K2 254 aa16.08■□□□□ 0.16
SHKBP1-216ENST00000598201 A0A1W2PR77 199 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 H0YGG7 62 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 GALR2O43603 387 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 NDUFS2O75306 463 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 OR12D1P0DN82 309 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 TYRP1P17643 537 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 CD27P26842 260 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 FNTBP49356 437 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 BLKP51451 505 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 ARHGDIAP52565 204 aa16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 ARF3P61204 181 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-216ENST00000598201 EPS8Q12929 822 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms