RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 PRRG2O14669 202 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 SBK3P0C264 359 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 NR2F6P10588 404 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 CNR1P21554 472 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 GCAP28676 217 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 PTGER1P34995 402 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 GPR85P60893 370 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 HSF1Q00613 529 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 DGAT2L6Q6ZPD8 337 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 MILR1Q7Z6M3 343 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 DOLPP1Q86YN1 238 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 TICAM1Q8IUC6 712 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 SLC15A4Q8N697 577 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 OR2M7Q8NG81 312 aa16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 PPWD1Q96BP3 646 aaKnown RBP16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 NSUN5Q96P11 429 aaKnown RBP16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 NCOA6Q14686 2063 aaPredicted RBP16.6■□□□□ 0.25
CHMP2A-203ENST00000597209 A8MT66 165 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 E9PLN8 166 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 RIPK2O43353 540 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 HS6ST1O60243 411 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 ZNF354AO60765 605 aaPredicted RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 PRKRAO75569 313 aaKnown RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 AIFM1O95831 613 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 OTCP00480 354 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 SLC35E2P0CK97 266 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 PTGS2P35354 604 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 ARL1P40616 181 aaPredicted RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 RFC3P40938 356 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 IFT88Q13099 833 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 ZNF630Q2M218 657 aaPredicted RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 ZNF750Q32MQ0 723 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 TTC19Q6DKK2 380 aaPredicted RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 PAOXQ6QHF9 649 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 C9orf40Q8IXQ3 194 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 DND1Q8IYX4 353 aaKnown RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 OR4F6Q8NGB9 312 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 FAM57AQ8TBR7 257 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 AGAP11Q8TF27 550 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 MTFMTQ96DP5 389 aaKnown RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 VKORC1Q9BQB6 163 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 FAM173AQ9BQD7 235 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 CHST11Q9NPF2 352 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 SEMA4BQ9NPR2 832 aaPredicted RBP16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 FETUBQ9UGM5 382 aa16.59■□□□□ 0.25
CHMP2A-203ENST00000597209 A0A1B0GTH9 108 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 OR6C76A6NM76 312 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 WASHC1A8K0Z3 465 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 TBL3Q12788 808 aaKnown RBP16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 ZNF791Q3KP31 576 aaPredicted RBP16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 NDUFAF5Q5TEU4 345 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 OR52E8Q6IFG1 317 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 GK5Q6ZS86 529 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 PAGE2Q7Z2X7 111 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 METTL4Q8N3J2 472 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 OR52N2Q8NGI0 321 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 SLC22A8Q8TCC7 542 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 TRPC4APQ8TEL6 797 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 DMRTA2Q96SC8 542 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 TXLNGYQ9BZA5 131 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 ELOVL6Q9H5J4 265 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 RUBCNLQ9H714 662 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 ZDHHC11Q9H8X9 412 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 SACM1LQ9NTJ5 587 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 TRPS1Q9UHF7 1281 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 GTF3C1Q12789 2109 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 TEX15Q9BXT5 2789 aa16.58■□□□□ 0.24
CHMP2A-203ENST00000597209 IQANK1A0A1B0GTG1 560 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 PINLYPA6NC86 204 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 GLOD5A6NK44 160 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 ACOT7O00154 380 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 HRKO00198 91 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 ADAM10O14672 748 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 OR10H2O60403 315 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 GLSO94925 669 aaPredicted RBP16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 NADKO95544 446 aaPredicted RBP16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 TAC1P20366 129 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 HTR1EP28566 365 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 SLC37A1P57057 533 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 PPIAP62937 165 aaKnown RBP16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 ASPHQ12797 758 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 HYAL4Q2M3T9 481 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 ARHGAP11AQ6P4F7 1023 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 SLC22A16Q86VW1 577 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 RIT1Q92963 219 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 MARVELD3Q96A59 401 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 TTTY12Q9BZ98 90 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 BRF2Q9HAW0 419 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 IL1RL2Q9HB29 575 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 SH2D2AQ9NP31 389 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 TEX10Q9NXF1 929 aaPredicted RBP16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 SNX6Q9UNH7 406 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 CACNA1DQ01668 2161 aa16.57■□□□□ 0.24
CHMP2A-203ENST00000597209 A0A1B0GTL3 188 aa16.56■□□□□ 0.24
CHMP2A-203ENST00000597209 PGRMC2O15173 223 aa16.56■□□□□ 0.24
CHMP2A-203ENST00000597209 ZNHIT1O43257 154 aa16.56■□□□□ 0.24
CHMP2A-203ENST00000597209 CDC40O60508 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHMP2A-203ENST00000597209 GUCY1B2O75343 617 aa16.56■□□□□ 0.24
CHMP2A-203ENST00000597209 CLDN14O95500 239 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms