RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 RNF165Q6ZSG1 346 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 BEST3Q8N1M1 668 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 Q8NA96 180 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 CATSPER1Q8NEC5 780 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 OR8K3Q8NH51 312 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 APIPQ96GX9 242 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 LUZP4Q9P127 313 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 CFAP46Q8IYW2 2715 aa16.11■□□□□ 0.17
SHKBP1-212ENST00000596163 ZNF462Q96JM2 2506 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 GABRR3A8MPY1 467 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 PRKRAO75569 313 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 ANXA4P09525 319 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 TIA1P31483 386 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 XKP51811 444 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 OC90Q02509 493 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 HEPACAMQ14CZ8 416 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 CLEC6AQ6EIG7 209 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 SLC48A1Q6P1K1 146 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 ZCCHC23Q6ZST2 131 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 ATCAYQ86WG3 371 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 SAMD14Q8IZD0 417 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 ARMC10Q8N2F6 343 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 AMER2Q8N7J2 671 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 SLC2A12Q8TD20 617 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 RIT1Q92963 219 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 PPWD1Q96BP3 646 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 SENP5Q96HI0 755 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 MAP10Q9P2G4 905 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 FIS1Q9Y3D6 152 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 PCDHGA10Q9Y5H3 936 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 CSAG2Q9Y5P2 127 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 COPG1Q9Y678 874 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 ZNF780BQ9Y6R6 833 aa16.1■□□□□ 0.17
SHKBP1-212ENST00000596163 PRAMEF2O60811 474 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 SEC22BO75396 215 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 DDAH2O95865 285 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 SERPINE1P05121 402 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 PORP16435 677 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 PRPH2P23942 346 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 GRK2P25098 689 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 ALDH9A1P49189 494 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 TUBA3CQ13748 450 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 SPRED3Q2MJR0 410 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 SH2D4BQ5SQS7 431 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 HHATQ5VTY9 493 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 KANK2Q63ZY3 851 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 TUBA3EQ6PEY2 450 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 KIRREL3Q8IZU9 778 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 CISD2Q8N5K1 135 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 C16orf78Q8WTQ4 265 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 FBXL20Q96IG2 436 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 NPAS2Q99743 824 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 CCT7Q99832 543 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 TRIM4Q9C037 500 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 TMBIM4Q9HC24 238 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 TNFRSF12AQ9NP84 129 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 AGPAT4Q9NRZ5 378 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 RYDENQ9NUL5 291 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 DLGAP4Q9Y2H0 992 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 YARS2Q9Y2Z4 477 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 PCDHGB6Q9Y5F9 930 aa16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 TNRC6AQ8NDV7 1962 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-212ENST00000596163 BOD1L1Q8NFC6 3051 aa16.08■□□□□ 0.17
SHKBP1-212ENST00000596163 WDR91A4D1P6 747 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 WASHC1A8K0Z3 465 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 TMEM114B3SHH9 223 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 NPIPB8E9PQR5 432 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 VPS4BO75351 444 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 ERAL1O75616 437 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 HSPA4LO95757 839 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 F10P00742 488 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CHRNGP07510 517 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 DHRS4L1P0CG22 281 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CPMP14384 443 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CD46P15529 392 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CSNK2A2P19784 350 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 TRHRP34981 398 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CD96P40200 585 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CYB561P49447 251 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 HLCSP50747 726 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 RAE1P78406 368 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 FOXK1P85037 733 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF267Q14586 743 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CHI3L2Q15782 390 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 INAQ16352 499 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 FAM219BQ5XKK7 198 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 DDIASQ8IXT1 998 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 OR6Y1Q8NGX8 325 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF721Q8TF20 911 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 THAP3Q8WTV1 239 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 MIB2Q96AX9 1013 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 ZBTB9Q96C00 473 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 C11orf24Q96F05 449 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 C5orf34Q96MH7 638 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 PAIP2Q9BPZ3 127 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CNPPD1Q9BV87 410 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 LRTM1Q9HBL6 345 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 GIMAP4Q9NUV9 329 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 C1orf109Q9NX04 203 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms