RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 DDX39BQ13838 428 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 DEPDC1Q5TB30 811 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 KHDRBS2Q5VWX1 349 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 TTC19Q6DKK2 380 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 ARHGAP11AQ6P4F7 1023 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 MDGA2Q7Z553 956 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 GPALPP1Q8IXQ4 340 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 RDH11Q8TC12 318 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 ASB5Q8WWX0 329 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 RGMAQ96B86 450 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 QRFPRQ96P65 431 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 TMEM109Q9BVC6 243 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 IQCGQ9H095 443 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 TP63Q9H3D4 680 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 TIMMDC1Q9NPL8 285 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 FBXW2Q9UKT8 454 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 MRPS33Q9Y291 106 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 YARS2Q9Y2Z4 477 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 CLDN16Q9Y5I7 305 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 SPACA6W5XKT8 324 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 F8P00451 2351 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 SYNDIG1LA6NDD5 238 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 FOXE1O00358 373 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 CLDN4O14493 209 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 CDC40O60508 579 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 ERLIN1O75477 346 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 TBX6O95947 436 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 CHRNB4P30926 498 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 RFC3P40938 356 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 RAP1GDS1P52306 607 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 CLCQ05315 142 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 SLC18A2Q05940 514 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 IFT88Q13099 833 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 GGTA1PQ4G0N0 100 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 ZNF678Q5SXM1 525 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 ADNP2Q6IQ32 1131 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 CROCCP2Q86T23 111 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 CCDC63Q8NA47 563 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 OR52B6Q8NGF0 335 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 LILRB4Q8NHJ6 448 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 ZBTB26Q9HCK0 441 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 LGALS13Q9UHV8 139 aa16.29■□□□□ 0.2
SHKBP1-203ENST00000594298 PCNX1Q96RV3 2341 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 A0A0G2JN53 185 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 FOXO6A8MYZ6 492 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 ZFAND5O76080 213 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 SSR4P51571 173 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 CDH13P55290 713 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 RAB38P57729 211 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 GPR85P60893 370 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 TFF3Q07654 80 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 TRAF3Q13114 568 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 CUL3Q13618 768 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 RUNX2Q13950 521 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 UNC50Q53HI1 259 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 FRG2Q64ET8 278 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 OR4C11Q6IEV9 310 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 ZYG11AQ6WRX3 759 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 C7orf57Q8NEG2 295 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 OR4F6Q8NGB9 312 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 OR52N2Q8NGI0 321 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 WDR20Q8TBZ3 569 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 TRPC4APQ8TEL6 797 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 RND1Q92730 232 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 NCLNQ969V3 563 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 L3HYPDHQ96EM0 354 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 NSUN5Q96P11 429 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 CDK15Q96Q40 435 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 FRG2BQ96QU4 278 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 MTERF1Q99551 399 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 ELOVL6Q9H5J4 265 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 ADAP2Q9NPF8 381 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 DMRT3Q9NQL9 472 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 PRDM7Q9NQW5 492 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 NPDC1Q9NQX5 325 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 PRTFDC1Q9NRG1 225 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 PNO1Q9NRX1 252 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 SNX6Q9UNH7 406 aa16.28■□□□□ 0.2
SHKBP1-203ENST00000594298 TMEM200CA6NKL6 621 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 TGFBR3LH3BV60 316 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 PLIN3O60664 434 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 PROCP04070 461 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 PPP2R1BP30154 601 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 SSR2P43308 183 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 RPS13P62277 151 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 PAOXQ6QHF9 649 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 RGS9BPQ6ZS82 235 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 TRABD2AQ86V40 505 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 ZNF595Q8IYB9 648 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 C4orf33Q8N1A6 199 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 ACOT4Q8N9L9 421 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 PSD4Q8NDX1 1056 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 TMEM52Q8NDY8 209 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 OR51B5Q9H339 312 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 LYRM4Q9HD34 91 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 DEPPQ9NTK1 212 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 NMRK1Q9NWW6 199 aa16.27■□□□□ 0.2
SHKBP1-203ENST00000594298 MKS1Q9NXB0 559 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms