RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 C16orf52Q8NHV5 167 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 DCAKDQ8WVC6 231 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 RASL10BQ96S79 203 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 RPF2Q9H7B2 306 aaKnown RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 LIN28AQ9H9Z2 209 aaKnown RBP12.24□□□□□ -0.45
H3F3B-213ENST00000593254 PSD3Q9NYI0 1048 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 XPR1Q9UBH6 696 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 PHF11Q9UIL8 331 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 TMCO1Q9UM00 188 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 PPT2Q9UMR5 302 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 MEMO1Q9Y316 297 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 RNF11Q9Y3C5 154 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 ATG4BQ9Y4P1 393 aa12.24□□□□□ -0.45
H3F3B-213ENST00000593254 NINQ8N4C6 2090 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 HCFC1P51610 2035 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 A0A0A6YYD5 115 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 A0A1B0GTL3 188 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 A8MVJ9 347 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 FOXE1O00358 373 aaPredicted RBP12.23□□□□□ -0.45
H3F3B-213ENST00000593254 OR7A17O14581 309 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 PEX1O43933 1283 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 EEDO75530 441 aaKnown RBP12.23□□□□□ -0.45
H3F3B-213ENST00000593254 OR6B1O95007 311 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 CLDN9O95484 217 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 NADKO95544 446 aaPredicted RBP12.23□□□□□ -0.45
H3F3B-213ENST00000593254 ETHE1O95571 254 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 COX7A2P14406 83 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 TNNI3P19429 210 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 TLX1P31314 330 aaPredicted RBP12.23□□□□□ -0.45
H3F3B-213ENST00000593254 BSGP35613 385 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 STT3AP46977 705 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 ART1P52961 327 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 RNF4P78317 190 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 HSF1Q00613 529 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 FOLH1Q04609 750 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 BIKQ13323 160 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 C18orf63Q68DL7 685 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 OR4N5Q8IXE1 308 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 PSD4Q8NDX1 1056 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 OR52B6Q8NGF0 335 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF721Q8TF20 911 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 ASB15Q8WXK1 588 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 TANKQ92844 425 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 PHF21BQ96EK2 531 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 NTMT1Q9BV86 223 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 NOL11Q9H8H0 719 aaKnown RBP12.23□□□□□ -0.45
H3F3B-213ENST00000593254 DDX31Q9H8H2 851 aaKnown RBP12.23□□□□□ -0.45
H3F3B-213ENST00000593254 ZBTB26Q9HCK0 441 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 TIMMDC1Q9NPL8 285 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 HPF1Q9NWY4 346 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 PCTPQ9UKL6 214 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 ERVK-11Q9UQG0 969 aa12.23□□□□□ -0.45
H3F3B-213ENST00000593254 PHF3Q92576 2039 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 A0A087WUV0 522 aaPredicted RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 FAM221AA4D161 298 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 TRIM49D1C9J1S8 452 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 WWP2O00308 870 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 TFECO14948 347 aaPredicted RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 PROM1O43490 865 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 TMPRSS11DO60235 418 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 PRKRAO75569 313 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 SEMA3DO95025 777 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 IGKV3-11P04433 115 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 CD99P14209 185 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 ABOP16442 354 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 PTGER1P34995 402 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 RFC3P40938 356 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 BUD31P41223 144 aaPredicted RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 SOX3P41225 446 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 NEK2P51955 445 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 CCNG1P51959 295 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 GPR85P60893 370 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 PLIN5Q00G26 463 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 TRAF3Q13114 568 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 IL20RBQ6UXL0 311 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 MEX3BQ6ZN04 569 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 FGD2Q7Z6J4 655 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 OR5L2Q8NGL0 311 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 UHMK1Q8TAS1 419 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 SCYL1Q96KG9 808 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 NSUN5Q96P11 429 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 DGAT2Q96PD7 388 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 CDK15Q96Q40 435 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 MRPL57Q9BQC6 102 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 MRPL46Q9H2W6 279 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 DEPPQ9NTK1 212 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 LYARQ9NX58 379 aaKnown RBP12.22□□□□□ -0.45
H3F3B-213ENST00000593254 TNFRSF10DQ9UBN6 386 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 COPS7AQ9UBW8 275 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 ASB4Q9Y574 426 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 FREM3P0C091 2139 aa12.22□□□□□ -0.45
H3F3B-213ENST00000593254 JMJD1CQ15652 2540 aa12.21□□□□□ -0.45
H3F3B-213ENST00000593254 EXOC1LA0A1B0GW35 172 aa12.21□□□□□ -0.45
H3F3B-213ENST00000593254 ZNHIT1O43257 154 aa12.21□□□□□ -0.45
H3F3B-213ENST00000593254 HS6ST1O60243 411 aa12.21□□□□□ -0.45
H3F3B-213ENST00000593254 ZNF354AO60765 605 aaPredicted RBP12.21□□□□□ -0.45
H3F3B-213ENST00000593254 SMIM24O75264 130 aa12.21□□□□□ -0.45
H3F3B-213ENST00000593254 RPS17P08708 135 aaKnown RBP12.21□□□□□ -0.45
H3F3B-213ENST00000593254 ABHD2P08910 425 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms