RNA–Protein interactions for RNA: ENST00000592275.5

USP36-222, Transcript of ubiquitin specific peptidase 36, human

TSL 4

Gene USP36, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP36-222	ENST00000592275	SYT5	O00445	386 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	PROM1	O43490	865 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	TRIM3	O75382	744 aa	Predicted RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	PRKRA	O75569	313 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	TCP1	P17987	556 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	CPN2	P22792	545 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	RPL21	P46778	160 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	ATP6V0D1	P61421	351 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	IRF8	Q02556	426 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	CRYZ	Q08257	329 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	ILF2	Q12905	390 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	FOXD4	Q12950	439 aa	Predicted RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	EBP	Q15125	230 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	ACSF3	Q4G176	576 aa	Predicted RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	FLYWCH1	Q4VC44	716 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	KHDRBS2	Q5VWX1	349 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	SLC22A10	Q63ZE4	541 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	C18orf63	Q68DL7	685 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	KLHL7	Q8IXQ5	586 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	DND1	Q8IYX4	353 aa	Known RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	RNF175	Q8N4F7	328 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	OR7G3	Q8NG95	312 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	NEIL3	Q8TAT5	605 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	DGAT2	Q96PD7	388 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	ATOH8	Q96SQ7	321 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	CD244	Q9BZW8	370 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	UBQLN3	Q9H347	655 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	LDAH	Q9H6V9	325 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	CBLC	Q9ULV8	474 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	BOK	Q9UMX3	212 aa	Predicted RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	PLEKHA6	Q9Y2H5	1048 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13	□□□□□ -0.33
USP36-222	ENST00000592275	TSC22D4	Q9Y3Q8	395 aa		13	□□□□□ -0.33
USP36-222	ENST00000592275	FAM159B	A6NKW6	160 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275		A6NNC1	897 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	FAM47E-STBD1	D6RA91	191 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	SAP18	O00422	153 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	PLPP1	O14494	284 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	CCNT2	O60583	730 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	SH3BGRL	O75368	114 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	TGFB1	P01137	390 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	COX7A2	P14406	83 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	SERPINB1	P30740	379 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	SSTR1	P30872	391 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	SSR2	P43308	183 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	KIR2DL3	P43628	341 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	ASCL1	P50553	236 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	WNT3	P56703	355 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	SLC37A1	P57057	533 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	PLIN5	Q00G26	463 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	TBL3	Q12788	808 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	CEBPE	Q15744	281 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	NTRK2	Q16620	822 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	DEPDC1	Q5TB30	811 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	FNDC7	Q5VTL7	733 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	MRM1	Q6IN84	353 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	GRHL2	Q6ISB3	625 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	MED27	Q6P2C8	311 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	CAPN12	Q6ZSI9	719 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	CDC20B	Q86Y33	519 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	ZBED8	Q8IZ13	594 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	CHDH	Q8NE62	594 aa	Predicted RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	C7orf57	Q8NEG2	295 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	TNIP2	Q8NFZ5	429 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	DOK4	Q8TEW6	326 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	PPWD1	Q96BP3	646 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	MBD6	Q96DN6	1003 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	ALPK1	Q96QP1	1244 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	PHACTR1	Q9C0D0	580 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	WWTR1	Q9GZV5	400 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	OR51B5	Q9H339	312 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	RPF2	Q9H7B2	306 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	DMRT3	Q9NQL9	472 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	RYDEN	Q9NUL5	291 aa	Known RBP	12.99	□□□□□ -0.33
USP36-222	ENST00000592275	NUDT4	Q9NZJ9	180 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	CD274	Q9NZQ7	290 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	CNIH4	Q9P003	139 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	IKBKG	Q9Y6K9	419 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	SPACA6	W5XKT8	324 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	VPS13C	Q709C8	3753 aa		12.99	□□□□□ -0.33
USP36-222	ENST00000592275	MAP1A	P78559	2803 aa	Predicted RBP	12.98	□□□□□ -0.33
USP36-222	ENST00000592275	NIPBL	Q6KC79	2804 aa	eCLIP	12.98	□□□□□ -0.33
USP36-222	ENST00000592275		A0A0A6YYD5	115 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	HSPB2	A8KAH6	182 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	LRAT	O95237	230 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	EPPIN	O95925	133 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	SLC35E2B	P0CK96	405 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	MTHFD2	P13995	350 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	ALOX15	P16050	662 aa	Predicted RBP	12.98	□□□□□ -0.33
USP36-222	ENST00000592275	STMN1	P16949	149 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	PEX19	P40855	299 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	ZNF136	P52737	540 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	SLC12A2	P55011	1212 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	HERVK_113	P63132	956 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	ERVK-8	P63133	956 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	KCNJ2	P63252	427 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	SLAMF1	Q13291	335 aa		12.98	□□□□□ -0.33
USP36-222	ENST00000592275	HSPB2	Q16082	182 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms