RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 OR52B2Q96RD2 323 aa12.05□□□□□ -0.48
DDX39A-213ENST00000590315 EBF4Q9BQW3 602 aa12.05□□□□□ -0.48
DDX39A-213ENST00000590315 PELOQ9BRX2 385 aaKnown RBP12.05□□□□□ -0.48
DDX39A-213ENST00000590315 DPY30Q9C005 99 aa12.05□□□□□ -0.48
DDX39A-213ENST00000590315 BRINP2Q9C0B6 783 aa12.05□□□□□ -0.48
DDX39A-213ENST00000590315 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
DDX39A-213ENST00000590315 ADAP2Q9NPF8 381 aa12.05□□□□□ -0.48
DDX39A-213ENST00000590315 CLCA3PQ9Y6N3 262 aa12.05□□□□□ -0.48
DDX39A-213ENST00000590315 IGKV3D-11A0A0A0MRZ8 115 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 A0A1W2PS29 197 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 SAGE2PA6NJ88 616 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 C17orf105B2RV13 164 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 UBDO15205 165 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 PDPK1O15530 556 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 PRR35P0CG20 571 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 PORP16435 677 aaPredicted RBP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 PTGER1P34995 402 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 RPL3P39023 403 aaKnown RBP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 IDH3AP50213 366 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 CCL11P51671 97 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 XKP51811 444 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 DIO3P55073 304 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 RAPSNQ13702 412 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 PCOLCEQ15113 449 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ELAVL1Q15717 326 aaKnown RBP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 SMU1Q2TAY7 513 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ZNF750Q32MQ0 723 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 PGS1Q32NB8 556 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 LSM12Q3MHD2 195 aaKnown RBP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 CRTC2Q53ET0 693 aaPredicted RBP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 DCAF10Q5QP82 559 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 BORAQ6PGQ7 559 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 LARP4Q71RC2 724 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 MED25Q71SY5 747 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 R3HCC1LQ7Z5L2 792 aaKnown RBP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 FAM9CQ8IZT9 166 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ACTRT2Q8TDY3 377 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 C11orf24Q96F05 449 aaPredicted RBP12.04□□□□□ -0.48
DDX39A-213ENST00000590315 CHMP6Q96FZ7 201 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ZBTB18Q99592 522 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 TUBB6Q9BUF5 446 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 CNPPD1Q9BV87 410 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 OR8D2Q9GZM6 311 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ZNF700Q9H0M5 742 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ING2Q9H160 280 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 REEP4Q9H6H4 257 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ATP13A2Q9NQ11 1180 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 FREM2Q5SZK8 3169 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 ASPMQ8IZT6 3477 aa12.04□□□□□ -0.48
DDX39A-213ENST00000590315 LOC102723996A0A087X1L8 192 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 ZNF195O14628 629 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 SCAMP2O15127 329 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 DNAJB5O75953 348 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 CELA2AP08217 269 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 ALDOCP09972 364 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 CPMP14384 443 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 CSNK2A2P19784 350 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 NCF2P19878 526 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 GPC1P35052 558 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 STT3AP46977 705 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 ARFIP2P53365 341 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 SLC26A5P58743 744 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 AIMP2Q13155 320 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 EXT1Q16394 746 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 TMEM198Q66K66 360 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 OGFOD2Q6N063 350 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 KBTBD2Q8IY47 623 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 ST13P4Q8IZP2 240 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 LRRC25Q8N386 305 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 KRTCAP2Q8N6L1 136 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 TMEM102Q8N9M5 508 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 C7orf57Q8NEG2 295 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 OR14A16Q8NHC5 309 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 APOBEC4Q8WW27 367 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 DAZLQ92904 295 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 EXTL1Q92935 676 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 NACC2Q96BF6 587 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 THOC3Q96J01 351 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 MAELQ96JY0 434 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 PRPF18Q99633 342 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 SIKE1Q9BRV8 207 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 RABEP2Q9H5N1 569 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 KCNK13Q9HB14 408 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 SLC35C2Q9NQQ7 365 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 AIG1Q9NVV5 245 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 ASIC5Q9NY37 505 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 EHD3Q9NZN3 535 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 COPS7AQ9UBW8 275 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 WBP11Q9Y2W2 641 aaKnown RBP12.03□□□□□ -0.48
DDX39A-213ENST00000590315 PTPRQQ9UMZ3 2332 aa12.03□□□□□ -0.48
DDX39A-213ENST00000590315 NUP214P35658 2090 aaPredicted RBP12.02□□□□□ -0.48
DDX39A-213ENST00000590315 ANKRD11Q6UB99 2663 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-213ENST00000590315 SLC35E2P0CK97 266 aa12.02□□□□□ -0.49
DDX39A-213ENST00000590315 IDO1P14902 403 aa12.02□□□□□ -0.49
DDX39A-213ENST00000590315 EFNA1P20827 205 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-213ENST00000590315 PRPS1L1P21108 318 aa12.02□□□□□ -0.49
DDX39A-213ENST00000590315 LSP1P33241 339 aa12.02□□□□□ -0.49
DDX39A-213ENST00000590315 NCBP2P52298 156 aaKnown RBP eCLIP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms