RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TMEM121BQ9BXQ6 578 aaPredicted RBP14.24□□□□□ -0.13
ATG4D-211ENST00000589753 BHLHE41Q9C0J9 482 aaPredicted RBP14.24□□□□□ -0.13
ATG4D-211ENST00000589753 CCDC167Q9P0B6 97 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 IL17BQ9UHF5 180 aa14.24□□□□□ -0.13
ATG4D-211ENST00000589753 MRPS18BQ9Y676 258 aaKnown RBP14.24□□□□□ -0.13
ATG4D-211ENST00000589753 MYOCOSA0A1B0GUC4 107 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 A0A1W2PS29 197 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 TCRBV16S1A1N1A0A5B0 115 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 PCDH17O14917 1159 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 SLC22A2O15244 555 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 PDPK1O15530 556 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 CREG1O75629 220 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 IL6P05231 212 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 SLC35E2P0CK97 266 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 CPMP14384 443 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 PORP16435 677 aaPredicted RBP14.23□□□□□ -0.13
ATG4D-211ENST00000589753 ADSLP30566 484 aaPredicted RBP14.23□□□□□ -0.13
ATG4D-211ENST00000589753 NTSP30990 170 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 S100A3P33764 101 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 FEN1P39748 380 aaKnown RBP14.23□□□□□ -0.13
ATG4D-211ENST00000589753 KIR3DL1P43629 444 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 ZFP36L2P47974 494 aaKnown RBP14.23□□□□□ -0.13
ATG4D-211ENST00000589753 KCNK10P57789 538 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 PLIN5Q00G26 463 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 KLF10Q13118 480 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 CEBPEQ15744 281 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 ZNF750Q32MQ0 723 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 SPANXN4Q5MJ08 99 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 TMEM205Q6UW68 189 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 LANCL3Q6ZV70 420 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 ANKRD37Q7Z713 158 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 FUNDC1Q8IVP5 155 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 NATD1Q8N6N6 113 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 OR8J2Q8NGG1 315 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 CIDECQ96AQ7 238 aaPredicted RBP14.23□□□□□ -0.13
ATG4D-211ENST00000589753 ZNF681Q96N22 645 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 BBS4Q96RK4 519 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 DPH1Q9BZG8 443 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 MYLK2Q9H1R3 596 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 ARMCX1Q9P291 453 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 C19orf25Q9UFG5 118 aaPredicted RBP14.23□□□□□ -0.13
ATG4D-211ENST00000589753 CAPN7Q9Y6W3 813 aa14.23□□□□□ -0.13
ATG4D-211ENST00000589753 SEC16AO15027 2179 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 MYO1GB0I1T2 1018 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 NR5A2O00482 541 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 OR10H2O60403 315 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 IFNA16P05015 189 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 PGRP06401 933 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 MMP11P24347 488 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 MPIP34949 423 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 FRKP42685 505 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-211ENST00000589753 STT3AP46977 705 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 DGKQP52824 942 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 RCAN2Q14206 197 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 MPEG1Q2M385 716 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 OR4F3Q6IEY1 312 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 BLOC1S3Q6QNY0 202 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 GK5Q6ZS86 529 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 CCDC116Q8IYX3 515 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 ST13P4Q8IZP2 240 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-211ENST00000589753 LRRC25Q8N386 305 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-211ENST00000589753 RBM18Q96H35 190 aaKnown RBP14.22□□□□□ -0.13
ATG4D-211ENST00000589753 DGAT2Q96PD7 388 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 LRRC37BQ96QE4 947 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 PELOQ9BRX2 385 aaKnown RBP14.22□□□□□ -0.13
ATG4D-211ENST00000589753 CCDC106Q9BWC9 280 aa14.22□□□□□ -0.13
ATG4D-211ENST00000589753 SCN2AQ99250 2005 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 A0A1W2PRB8 838 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 CCDC154A6NI56 674 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 KLK10O43240 276 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 CAPNS1P04632 268 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 ATP1B1P05026 303 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 OTX2P32243 289 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 NCBP2P52298 156 aaKnown RBP eCLIP14.21□□□□□ -0.13
ATG4D-211ENST00000589753 WNT3P56703 355 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 OR4D2P58180 307 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 PHC1P78364 1004 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 DUSP2Q05923 314 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 SRSF6Q13247 344 aaKnown RBP14.21□□□□□ -0.13
ATG4D-211ENST00000589753 IL10RAQ13651 578 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 TIGD2Q4W5G0 525 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 SFT2D3Q587I9 215 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 ANXA8L1Q5VT79 327 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 CPEB2Q7Z5Q1 589 aaKnown RBP14.21□□□□□ -0.13
ATG4D-211ENST00000589753 RAB43Q86YS6 212 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 VPS37AQ8NEZ2 397 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 ZFP28Q8NHY6 868 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 SUN3Q8TAQ9 357 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 NACC2Q96BF6 587 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 PPWD1Q96BP3 646 aaKnown RBP14.21□□□□□ -0.13
ATG4D-211ENST00000589753 SPDL1Q96EA4 605 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 ZBED6CLQ96FA7 236 aaPredicted RBP14.21□□□□□ -0.13
ATG4D-211ENST00000589753 AMDHD1Q96NU7 426 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 OR52E6Q96RD3 313 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 GLIPR2Q9H4G4 154 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 ADAP2Q9NPF8 381 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 SLAMF7Q9NQ25 335 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 PNO1Q9NRX1 252 aaKnown RBP14.21□□□□□ -0.13
ATG4D-211ENST00000589753 ACSS1Q9NUB1 689 aaPredicted RBP14.21□□□□□ -0.13
ATG4D-211ENST00000589753 FAM120CQ9NX05 1096 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms