RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CYP4Z1Q86W10 505 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 TBC1D3Q8IZP1 549 aaPredicted RBP9.44□□□□□ -0.9
VPS25-202ENST00000589219 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 MFSD9Q8NBP5 474 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 OR2L3Q8NG85 312 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 OR10G2Q8NGC3 310 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 OR4C15Q8NGM1 316 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 OR5AK3PQ8NH89 298 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 GIPC3Q8TF64 312 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 RASSF5Q8WWW0 418 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 MUL1Q969V5 352 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 MOAP1Q96BY2 351 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 PDXPQ96GD0 296 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 SLC35G5Q96KT7 338 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 KCNC2Q96PR1 638 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 BCL7BQ9BQE9 202 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 FANCEQ9HB96 536 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
VPS25-202ENST00000589219 SLC6A20Q9NP91 592 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 EXD2Q9NVH0 621 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 LYARQ9NX58 379 aaKnown RBP9.44□□□□□ -0.9
VPS25-202ENST00000589219 SCN3BQ9NY72 215 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 OR6C2Q9NZP2 312 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 NDUFAF4Q9P032 175 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 NDRG4Q9ULP0 352 aaKnown RBP9.44□□□□□ -0.9
VPS25-202ENST00000589219 SNX7Q9UNH6 387 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 POFUT2Q9Y2G5 429 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 TPRKBQ9Y3C4 175 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 PCM1Q15154 2024 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 ABCA7Q8IZY2 2146 aa9.44□□□□□ -0.9
VPS25-202ENST00000589219 IGKV1-8A0A0C4DH67 115 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 LRIT2A6NDA9 550 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 TRIM64BA6NI03 449 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 LRRC72A6NJI9 287 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 MITFO75030 526 aaPredicted RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 DIRAS1O95057 198 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 OPN1SWP03999 348 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 FUCA1P04066 466 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 IFNW1P05000 195 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 HNRNPA2B1P22626 353 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 HTR1BP28222 390 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 XCR1P46094 333 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 CLK3P49761 638 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 TMBIM6P55061 237 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 STXBP1P61764 594 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 CSNK2BP67870 215 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 MVKQ03426 396 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 PPP1R8Q12972 351 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 CDK5R2Q13319 367 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 SLC9A5Q14940 896 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 PRSS53Q2L4Q9 553 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 PMS2CLQ68D20 193 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 ZNF425Q6IV72 752 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 BHLHB9Q6PI77 547 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 DHRS4L2Q6PKH6 230 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 CEACAM20Q6UY09 585 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 FAM92BQ6ZTR7 304 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 UBE3DQ7Z6J8 389 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 GALNT5Q7Z7M9 940 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 ZNF605Q86T29 641 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 TSPYL5Q86VY4 417 aaPredicted RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 SPARTQ8N0X7 666 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 MMP21Q8N119 569 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 OR2L5Q8NG80 312 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 RAB2BQ8WUD1 216 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 IPCEF1Q8WWN9 437 aaPredicted RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 EXOSC8Q96B26 276 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 SLC22A18Q96BI1 424 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 C12orf43Q96C57 262 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 SPACA7Q96KW9 195 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 CNTNAP3BQ96NU0 1288 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 TEFMQ96QE5 360 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 NODALQ96S42 347 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 BARD1Q99728 777 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 PIP5K1AQ99755 562 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 MYOCQ99972 504 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 CNTNAP3Q9BZ76 1288 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 XKR8Q9H6D3 395 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 FZD3Q9NPG1 666 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 SLAMF7Q9NQ25 335 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 SEMA3GQ9NS98 782 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 SIRT3Q9NTG7 399 aaPredicted RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 GIMAP4Q9NUV9 329 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 ANKMY1Q9P2S6 941 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 P2RX2Q9UBL9 471 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 PCOLCE2Q9UKZ9 415 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 FAM32AQ9Y421 112 aaKnown RBP9.43□□□□□ -0.9
VPS25-202ENST00000589219 PCDHGB1Q9Y5G3 927 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 SNX8Q9Y5X2 465 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 ENPP4Q9Y6X5 453 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 PLXND1Q9Y4D7 1925 aa9.43□□□□□ -0.9
VPS25-202ENST00000589219 CNOT1A5YKK6 2376 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 OR52A4PA6NMU1 304 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 H3BMQ9 156 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 TM4SF5O14894 197 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 HAT1O14929 419 aa9.42□□□□□ -0.9
VPS25-202ENST00000589219 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
VPS25-202ENST00000589219 SLC31A1O15431 190 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms