RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZNF843Q8N446 348 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 NATD1Q8N6N6 113 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 CLEC1AQ8NC01 280 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 TSLPQ969D9 159 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 DGAT2Q96PD7 388 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 TSSK3Q96PN8 268 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 CCDC28BQ9BUN5 200 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 REEP4Q9H6H4 257 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 ADAP2Q9NPF8 381 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 GIMAP2Q9UG22 337 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 BAIAP2L1Q9UHR4 511 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 UTS2RQ9UKP6 389 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 CLCA3PQ9Y6N3 262 aa18.34■□□□□ 0.53
CIRBP-220ENST00000588917 FGF17O60258 216 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 KLHL41O60662 606 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 TBX19O60806 448 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 ITGB2P05107 769 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 PORP16435 677 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-220ENST00000588917 TACR1P25103 407 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 STT3AP46977 705 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 IDH3AP50213 366 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 EFNA3P52797 238 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 PLIN5Q00G26 463 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 RHDQ02161 417 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 AIMP2Q13155 320 aaKnown RBP18.33■□□□□ 0.52
CIRBP-220ENST00000588917 ATP1A4Q13733 1029 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 RPS6KA2Q15349 733 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 EXT1Q16394 746 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 PCSK4Q6UW60 755 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 LANCL3Q6ZV70 420 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 ZNF605Q86T29 641 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 TMEM151BQ8IW70 566 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 OR4N5Q8IXE1 308 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 APOBEC4Q8WW27 367 aaKnown RBP18.33■□□□□ 0.52
CIRBP-220ENST00000588917 DAZLQ92904 295 aaKnown RBP18.33■□□□□ 0.52
CIRBP-220ENST00000588917 C8orf44Q96CB5 159 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 KLHL29Q96CT2 875 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 WBP1Q96G27 269 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 ZNF764Q96H86 408 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-220ENST00000588917 EGLN2Q96KS0 407 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 C1orf50Q9BV19 199 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 TCF7L2Q9NQB0 619 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 PNO1Q9NRX1 252 aaKnown RBP18.33■□□□□ 0.52
CIRBP-220ENST00000588917 HEY2Q9UBP5 337 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 FBXL4Q9UKA2 621 aa18.33■□□□□ 0.52
CIRBP-220ENST00000588917 SETXQ7Z333 2677 aaKnown RBP18.32■□□□□ 0.52
CIRBP-220ENST00000588917 OR10H2O60403 315 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 PRKRAO75569 313 aaKnown RBP18.32■□□□□ 0.52
CIRBP-220ENST00000588917 ERAL1O75616 437 aaKnown RBP18.32■□□□□ 0.52
CIRBP-220ENST00000588917 G6PDP11413 515 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 COX6A1P12074 109 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 MPIP34949 423 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 HPCAL1P37235 193 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 CLDN8P56748 225 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 EEF1A2Q05639 463 aaKnown RBP18.32■□□□□ 0.52
CIRBP-220ENST00000588917 PCOLCEQ15113 449 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 GSTA3Q16772 222 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 DCAF10Q5QP82 559 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 ATP1A1-AS1Q5TC04 95 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 BORAQ6PGQ7 559 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 PAPD4Q6PIY7 484 aaKnown RBP18.32■□□□□ 0.52
CIRBP-220ENST00000588917 MAVSQ7Z434 540 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 TICAM1Q8IUC6 712 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 APLFQ8IW19 511 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-220ENST00000588917 OR14A16Q8NHC5 309 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 CHMP6Q96FZ7 201 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 NPHS2Q9NP85 383 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 SLC35C2Q9NQQ7 365 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 ATAD3AQ9NVI7 634 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 FGFR1OP2Q9NVK5 253 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 ENTPD4Q9Y227 616 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 CLDN16Q9Y5I7 305 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 ZNF462Q96JM2 2506 aa18.32■□□□□ 0.52
CIRBP-220ENST00000588917 WASHC1A8K0Z3 465 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 UBDO15205 165 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 CPMP14384 443 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 IDO1P14902 403 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 SOX8P57073 446 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 C21orf58P58505 322 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 LSM12Q3MHD2 195 aaKnown RBP18.31■□□□□ 0.52
CIRBP-220ENST00000588917 IRAK1BP1Q5VVH5 260 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 PLAG1Q6DJT9 500 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 RIPOR1Q6ZS17 1223 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 MORN4Q8NDC4 146 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 M1APQ8TC57 530 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 UCN3Q969E3 161 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 PPCDCQ96CD2 204 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 ART5Q96L15 291 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 IMMP1LQ96LU5 166 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 ZNF317Q96PQ6 595 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-220ENST00000588917 BBS4Q96RK4 519 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 DPY30Q9C005 99 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 ING2Q9H160 280 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 KCNMB2Q9Y691 235 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 ATMQ13315 3056 aa18.31■□□□□ 0.52
CIRBP-220ENST00000588917 SAGE2PA6NJ88 616 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 ARGFXA6NJG6 315 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 TGFBR3LH3BV60 316 aa18.3■□□□□ 0.52
CIRBP-220ENST00000588917 SEC24DO94855 1032 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-220ENST00000588917 ZIC2O95409 532 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms