RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TSPAN10Q9H1Z9 355 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-208ENST00000588692 NMRK1Q9NWW6 199 aa13.4□□□□□ -0.26
DDX39A-208ENST00000588692 ZNF835Q9Y2P0 537 aa13.4□□□□□ -0.26
DDX39A-208ENST00000588692 CCL21O00585 134 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 TFECO14948 347 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 GUCY1B2O75343 617 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 SUPT7LO94864 414 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 OR6B1O95007 311 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 SLC35E2P0CK97 266 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 HSD3B1P14060 373 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 HSD3B2P26439 372 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 HSD17B3P37058 310 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 SOX3P41225 446 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 RASA2Q15283 850 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 MPEG1Q2M385 716 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF678Q5SXM1 525 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 IL20RBQ6UXL0 311 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 C16orf47Q6ZP98 133 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 RTL4Q6ZR62 310 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 RPS27LQ71UM5 84 aaKnown RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 SPPL2CQ8IUH8 684 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 GSPT2Q8IYD1 628 aaKnown RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 METTL4Q8N3J2 472 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 GOLM1Q8NBJ4 401 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 LRRN4CLQ8ND94 238 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 TRPC4APQ8TEL6 797 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 MZB1Q8WU39 189 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 PPWD1Q96BP3 646 aaKnown RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 SGCZQ96LD1 299 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF382Q96SR6 550 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 MRPL1Q9BYD6 325 aaKnown RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 LIN28AQ9H9Z2 209 aaKnown RBP13.39□□□□□ -0.27
DDX39A-208ENST00000588692 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
DDX39A-208ENST00000588692 A0A1B0GTL3 188 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 GLOD5A6NK44 160 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 DLX3O60479 287 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 WISP2O76076 250 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 PDYNP01213 254 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 KRT6AP02538 564 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 GBAP04062 536 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 KRT6BP04259 564 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 KLK1P06870 262 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 PYGBP11216 843 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 ABOP16442 354 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 IMPDH1P20839 514 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 KRT6CP48668 564 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 MAPK12P53778 367 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 SGO1Q5FBB7 561 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 CCNYL2Q5T2Q4 361 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 NDUFAF5Q5TEU4 345 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 HIST2H2BCQ6DN03 193 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 MYO7BQ6PIF6 2116 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 RPTNQ6XPR3 784 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 COMMD6Q7Z4G1 85 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 C9orf40Q8IXQ3 194 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 DND1Q8IYX4 353 aaKnown RBP13.38□□□□□ -0.27
DDX39A-208ENST00000588692 SLC15A4Q8N697 577 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 SLC22A8Q8TCC7 542 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 RIT1Q92963 219 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 CCDC126Q96EE4 140 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 L3HYPDHQ96EM0 354 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 CCDC120Q96HB5 630 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 TMEM237Q96Q45 408 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 CNPPD1Q9BV87 410 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 TEX10Q9NXF1 929 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-208ENST00000588692 TBK1Q9UHD2 729 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 ZNF225Q9UK10 706 aa13.38□□□□□ -0.27
DDX39A-208ENST00000588692 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 GOLGA8RI6L899 631 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 PPP6CO00743 305 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 GLRA3O75311 464 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 OR4F21O95013 312 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 TSPAN8P19075 237 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 PIK3R1P27986 724 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 PRKAA2P54646 552 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 GPR85P60893 370 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 NAA20P61599 178 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 ERVK-8P63133 956 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 CSTF3Q12996 717 aaKnown RBP13.37□□□□□ -0.27
DDX39A-208ENST00000588692 LCP2Q13094 533 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 C3AR1Q16581 482 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 UNC50Q53HI1 259 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 PIGGQ5H8A4 983 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 RNF111Q6ZNA4 994 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 DGAT2L6Q6ZPD8 337 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 RGS9BPQ6ZS82 235 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 GK5Q6ZS86 529 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 GPRIN3Q6ZVF9 776 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 SLC29A4Q7RTT9 530 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 EID3Q8N140 333 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 UBLCP1Q8WVY7 318 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-208ENST00000588692 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
DDX39A-208ENST00000588692 SH3BGRL2Q9UJC5 107 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 ERVK-19Q9WJR5 959 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 GTF3C1Q12789 2109 aa13.37□□□□□ -0.27
DDX39A-208ENST00000588692 C1orf226A1L170 272 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms