RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CPN2P22792 545 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 SSR2P43308 183 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 KIR2DL3P43628 341 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 WNT3P56703 355 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 IRF8Q02556 426 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 LAPTM5Q13571 262 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 EBPQ15125 230 aaKnown RBP16.93■□□□□ 0.3
CCDC43-204ENST00000588687 SPRED3Q2MJR0 410 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 ACSF3Q4G176 576 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-204ENST00000588687 PAGE2BQ5JRK9 111 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 KHDRBS2Q5VWX1 349 aaKnown RBP16.93■□□□□ 0.3
CCDC43-204ENST00000588687 KLHL7Q8IXQ5 586 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 RNF175Q8N4F7 328 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 SLC15A4Q8N697 577 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 OR7G3Q8NG95 312 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 SLC22A8Q8TCC7 542 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 PPWD1Q96BP3 646 aaKnown RBP16.93■□□□□ 0.3
CCDC43-204ENST00000588687 DGAT2Q96PD7 388 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 ALPK1Q96QP1 1244 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 CD244Q9BZW8 370 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 CBLCQ9ULV8 474 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 BOKQ9UMX3 212 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-204ENST00000588687 PLEKHA6Q9Y2H5 1048 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 RPH3AQ9Y2J0 694 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-204ENST00000588687 A6NNC1 897 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 SAP18O00422 153 aaKnown RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 SH3BGRLO75368 114 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 TRIM3O75382 744 aaPredicted RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 LRATO95237 230 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 TGFB1P01137 390 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 COX7A2P14406 83 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 CEACAM8P31997 349 aaPredicted RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 HNRNPH2P55795 449 aaKnown RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 ATP6V0D1P61421 351 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 KCNJ2P63252 427 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 PLIN5Q00G26 463 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 TNFRSF17Q02223 184 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 CRYZQ08257 329 aaKnown RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 FLYWCH1Q4VC44 716 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 CDC20BQ86Y33 519 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 CREG2Q8IUH2 290 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 DND1Q8IYX4 353 aaKnown RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 ZNF441Q8N8Z8 693 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 TNIP2Q8NFZ5 429 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 UBTD2Q8WUN7 234 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 RMND5BQ96G75 393 aaPredicted RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 RBBP8Q99708 897 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 WWTR1Q9GZV5 400 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 RPF2Q9H7B2 306 aaKnown RBP16.92■□□□□ 0.3
CCDC43-204ENST00000588687 DMRT3Q9NQL9 472 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 CD274Q9NZQ7 290 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 SPACA6W5XKT8 324 aa16.92■□□□□ 0.3
CCDC43-204ENST00000588687 HSPB2A8KAH6 182 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 PLPP1O14494 284 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 CCNT2O60583 730 aaKnown RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 TCP1P17987 556 aaKnown RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 PEX19P40855 299 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 RPL21P46778 160 aaKnown RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 ASCL1P50553 236 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 SLC37A1P57057 533 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 TBL3Q12788 808 aaKnown RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 ILF2Q12905 390 aaKnown RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 DLG1Q12959 904 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 HSPB2Q16082 182 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 NTRK2Q16620 822 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 AP5B1Q2VPB7 878 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 DEPDC1Q5TB30 811 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 FNDC7Q5VTL7 733 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 C18orf63Q68DL7 685 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 MED27Q6P2C8 311 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 PAMR1Q6UXH9 720 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 CAPN12Q6ZSI9 719 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 ZBED8Q8IZ13 594 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 ST13P4Q8IZP2 240 aaPredicted RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 MMP21Q8N119 569 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 ZCCHC7Q8N3Z6 543 aaKnown RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 C7orf57Q8NEG2 295 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 DOK4Q8TEW6 326 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 NTNG2Q96CW9 530 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 MBD6Q96DN6 1003 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 TSPAN17Q96FV3 270 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 ATOH8Q96SQ7 321 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 PHACTR1Q9C0D0 580 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 OR51B5Q9H339 312 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 UBQLN3Q9H347 655 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 GSX1Q9H4S2 264 aaPredicted RBP16.91■□□□□ 0.3
CCDC43-204ENST00000588687 EXO5Q9H790 373 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 ALKBH4Q9NXW9 302 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 CNIH4Q9P003 139 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 DOCK7Q96N67 2140 aa16.91■□□□□ 0.3
CCDC43-204ENST00000588687 MPDZO75970 2070 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 WASHC1A8K0Z3 465 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 ALOX15P16050 662 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-204ENST00000588687 BMP5P22003 454 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 SERPINB1P30740 379 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 SSTR1P30872 391 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 UQCRC1P31930 480 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 TRPC1P48995 793 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 ZNF136P52737 540 aa16.9■□□□□ 0.3
CCDC43-204ENST00000588687 SLC12A2P55011 1212 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms